| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2961 |
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| Symbol | |
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| ID | 4033112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 3254010 |
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| End bp | 3257699 |
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| Gene Length | 3690 bp |
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| Protein Length | 1229 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637971404 |
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| Product | nitrate reductase, alpha subunit |
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| Protein accession | YP_578186 |
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| Protein GI | 92118457 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5013] Nitrate reductase alpha subunit |
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| TIGRFAM ID | [TIGR01580] respiratory nitrate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.193329 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACAACAG GCCTCGCGGC CGGACAACGC ACCGAGGAGA CGCAGATGAG CTGGATACTG
GACCTCGTTA ATCCCCGAGA GCGCAAGTGG GAAGAGTTCT ACCGTAACCG CTGGTCCCAC
GATAACGTTT TCCGCAGTAC GCATGGCGTC AACTGCACCG GTGGCTGCTC CTGGGCGATC
TACGTCAAGG ACGGGATCAT CACCTGGGAG ATGCAGCAGA CGGACTACCC GCTTCTTGAG
CGCAGTCTGC CTCCTTACGA GCCGCGAGGC TGCCAGCGTG GTATCTCCGC CTCCTGGTAT
GTCTACAGCC CGATCAGGAT AAAGTATCCA TACGTCCGCG GTCCGCTTCT CGACATGTGG
CGCGAAGCGA AGGCGTCGAG CGCCGATCCG GTGCAGGCCT GGGGTGCGCT GGTCGGAGAC
GAGCAAAAGC GGGCGCGCAT GCAGAAGGCG CGCGGCAAGG GTGGTTACCG TCGCGCCAAG
TGGGAAGAGC TGGTCGAGCT GATTGCCGCT GCCAGCTTGC ACACCGCGCG CAAGCACGGG
CCGGACCGGA TAATGGGCTT CTCGCCGATC CCGGCGATGT CGATGCTGTC GTTCGCGGCC
GGTACACGCT TCCTGTCGCT CATGGGCGGA TCGTTACTGA GCTTCTACGA CTGGTACGCC
GATCTGCCGA CCTCGTTCCC GGAAATCTGG GGCGACCAGA CCGACGTGTG CGAAAGCGCG
GACTGGTACA ACTCCAAGTT CATCGTTTCG ATGGCGTCGA ACCTGAACAT GACGCGTACC
CCTGACGTGC ATTTCATCGC GGAAGCACGC ACCGAGGGAA CCAAGTTCGT GGTTCTCTCG
CCGGACTTCA GCCAGATCGC CAAATACTGC GACGAATGGA TTCCGATCCA GGCCGGACAG
GACACGGCGT TGTGGATGGC GGCCAATCAC GTCATCCTCA AGGAGTACTA CGTCGATCGT
CAGGTTCCTT ACTTCATCGA CTACGTCAAG CGTTACACCG ACCTTCCGTT CCTTGTGGAA
CTGGAGCCCA ACGGGACCAC GTACAAGACG GGCCGCTTGC TGCGCGCCAG GCATGTTCCT
CGCTACAAGG ATGTCGAAAA CGGCGACTGG AAGATGCTGT TGCTTGACGC CAACAGCGGC
GAGCTACGGG CGCCGAAGGG TCAGGTCGGT GACCGCTGGG GTTCTGTGCA CGGTAAATGG
AACCTGTCCG GCGAGGACAC CCTGGACAAT AGTCCGCTCG ATCCGGTGCT GAGCTTTATC
GATCGATCCG ATGACGTGGT GCAGGTTGGG TTCGACGATT TCGCGAACGG ACGTATCGTC
TCGCGCGGCG TCCCGGTGCG GCGCATCGCC ACGGACAAGG GCGAGATTCT GTGCGCGACC
GGCTTCGACA TCATGATGTC CCAGTTTGGT ATCAGCCGCG GCCTGGAAGG CGCTTTTGCG
ACCAGCTATG ACGACGAGGA TGCGCCTTAT ACCCCGGCGT GGCAGGAGCG TCATACCGGT
ATCGGCCGCG AGACCGCGAT CAGGTTTGCG CGTGAGTTTG CGACCACCGC AGAGTACACC
AACGGCAAAT CCATGGTGAT CGTGGGCGCC AGCGCCAACC ACTGGTACTA CAACAACCTC
TGTTACCGGT CGGCTACGGT CGCTTTGATC CTGTGCGGTT GTTGCGGCGT CAACGGTGGC
GGCATCAACC ACTACGTGGG TCAGGAAAAG CTCGCGCCCG TTGCGCCTTG GGCTTCGATT
GCTCTGGCGC TCGACTGGTC CAAGCCGCCG CGGGTCGTGC AGTCGTCGAC CTGGCACTAT
GCCCATAGCT GTCAGTGGCG CTACGAACAG GAGTTTACGG AGTACGGCCT GACGGCGCCA
AATCCGCGCT GGGCCAAGGG CCATGCGATC GACCTCGAGG CAAAGGCGGT GCGTTCGGGC
TGGATGCCGT TCACGCCGCA CTTCAACCGC AATCCGATCG AAGTTGCGGC TGAGGCCGAG
CGTGCCGGTG CAAAGAGCAC TGAGGACATC GCGACTCACG TTATCGATCA GGTCGCGAGC
AAGAAGTTGA ATCTCGCGAT CGAGGATCCC GATGCTGCCG AGAACTGGCC GCGGTTGTGG
TTCATCTGGC GCGGCAACGC GATCCAGTCG AGCGCCAAGG GGCATGAGTT CTTCCTACGG
CATTACCTCG GGACGCACGA CAACGCCATC GCCGAGGATC GCGCCAAGGG TAAGACGCAT
ACGGTGAAAT ACCACGACAC GGCGCCGCGC GGAAAGTATG ACCTGGTGGT CGACCTCAAT
TTCCGCATGG ATACCTCGTC GCTCTACTCC GACATCGTGC TGCCGACGGC GTTCTGGTAC
GAGAAGAACG ACCTCAACAC GACTGACCTG CACTCGTTCC TGCATGTTCT GGGACAGGCG
GTTCCGCCGG TGTGGGAGTC CAAGACGGAC TGGGATATCT TCAAGCTGAT CGCCAAGAAG
GTCAGCGAGT TGGCTCCGCT GGCGTTCTCC AAGCCTGTGC GTGATGTTGT CCTTCAACCG
CTCATGCACG ATACGCCGGA CGAGTTGGCA CAGCCGGAGA TTCTCGACTG GGCCGAGGGC
GAGTGTAAGC CGGTGCCGGG CAAGTCGTTC CCGCACGTGC GGGTGGTCGA GCGTGACTAC
GCGAATTTGT ACAACAAATT CATCTCGTTC GGACCGAAGG CGCGGGAGGA CGGTGTTTCG
GCCGTCGGAG TGAATGTTCC GATCAAGAAA CAATATGACC AGATGCTCGA CAATCCCATC
ATGCCGATGC CTGATCCGAG GCATATGCGG TGTGTGGAGT GGGGTGGCAA ACGGTATCCG
AGCCTTGAGG ACGTGCTCGA CGGATGCAAC ACGGTGCTGC TGTGTGCTCC GGAGGCGAAC
GGCGAGGTTT GCTACCAGGC CTTCCATAAT GAGGAGCATC ACGTCGGTCT TCCGCTTGTC
GACCTTGCTG AGCCTACCCG AAACGTTGCG ACGACGTTCT ATGACCTTAC GCGTCAGCCG
AGGCGTCTCC TTACGAGCCC CTGCTGGACG GGGATGATGA ATGACGGTCG CGCTTATTCC
GCATGGTGCA TGAACGTCGA GCGCCTGGTG CCTTGGCGGA CGCTGACCGG CCGCCAAACG
CTGTACATCG ACCACCAGTG GTACCTTGAT TTCGGCGAGC ACATACCGAC CTACAAGCCG
CGGCTCAATC CGCGCAAGAC CGGCGATATC GTGAAAAGCC GGGTCGATGA CCGCTCTCTG
GTGCTGAACT ACATCACTCC GCACGGAAAG TGGAACATCC ACTCGACCTA CAAAGATAAC
CACCGCATGT TGATGTTGTC TCGCGGCATG GATCCGGTGT GGATCAATGA CAGGGACGCG
GAGAAGGTAG GGATCGAGGA TAACGACTGG GTCGAGGTCT ACAACGACAA CGGTGTGGTC
GTGACCCGCG CCAACGTGAG CCGCCGAATT CAGCCTGGCA CCTGCATGTA CTACCACGCG
GTCGAGCGTA CGGTGTACAT TCCGAAATCG CAGGAGCGTA AGTGGCGTGG CGGCGGACAC
AACAGCCTGA CGCGTACTCG TATCAACCCG CTGTTCCTGG CCGGTGGCTA TGCCCAGTTC
ACGTACGGCT GGAACTATTG GGGTCCGACT GGTATCTTAA CGCGCGACAC CCACGTCGTC
GTGCGCAAGA TGGAGAAGTT GGAATGGTAG
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| Protein sequence | MTTGLAAGQR TEETQMSWIL DLVNPRERKW EEFYRNRWSH DNVFRSTHGV NCTGGCSWAI
YVKDGIITWE MQQTDYPLLE RSLPPYEPRG CQRGISASWY VYSPIRIKYP YVRGPLLDMW
REAKASSADP VQAWGALVGD EQKRARMQKA RGKGGYRRAK WEELVELIAA ASLHTARKHG
PDRIMGFSPI PAMSMLSFAA GTRFLSLMGG SLLSFYDWYA DLPTSFPEIW GDQTDVCESA
DWYNSKFIVS MASNLNMTRT PDVHFIAEAR TEGTKFVVLS PDFSQIAKYC DEWIPIQAGQ
DTALWMAANH VILKEYYVDR QVPYFIDYVK RYTDLPFLVE LEPNGTTYKT GRLLRARHVP
RYKDVENGDW KMLLLDANSG ELRAPKGQVG DRWGSVHGKW NLSGEDTLDN SPLDPVLSFI
DRSDDVVQVG FDDFANGRIV SRGVPVRRIA TDKGEILCAT GFDIMMSQFG ISRGLEGAFA
TSYDDEDAPY TPAWQERHTG IGRETAIRFA REFATTAEYT NGKSMVIVGA SANHWYYNNL
CYRSATVALI LCGCCGVNGG GINHYVGQEK LAPVAPWASI ALALDWSKPP RVVQSSTWHY
AHSCQWRYEQ EFTEYGLTAP NPRWAKGHAI DLEAKAVRSG WMPFTPHFNR NPIEVAAEAE
RAGAKSTEDI ATHVIDQVAS KKLNLAIEDP DAAENWPRLW FIWRGNAIQS SAKGHEFFLR
HYLGTHDNAI AEDRAKGKTH TVKYHDTAPR GKYDLVVDLN FRMDTSSLYS DIVLPTAFWY
EKNDLNTTDL HSFLHVLGQA VPPVWESKTD WDIFKLIAKK VSELAPLAFS KPVRDVVLQP
LMHDTPDELA QPEILDWAEG ECKPVPGKSF PHVRVVERDY ANLYNKFISF GPKAREDGVS
AVGVNVPIKK QYDQMLDNPI MPMPDPRHMR CVEWGGKRYP SLEDVLDGCN TVLLCAPEAN
GEVCYQAFHN EEHHVGLPLV DLAEPTRNVA TTFYDLTRQP RRLLTSPCWT GMMNDGRAYS
AWCMNVERLV PWRTLTGRQT LYIDHQWYLD FGEHIPTYKP RLNPRKTGDI VKSRVDDRSL
VLNYITPHGK WNIHSTYKDN HRMLMLSRGM DPVWINDRDA EKVGIEDNDW VEVYNDNGVV
VTRANVSRRI QPGTCMYYHA VERTVYIPKS QERKWRGGGH NSLTRTRINP LFLAGGYAQF
TYGWNYWGPT GILTRDTHVV VRKMEKLEW
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