Gene Nham_2894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2894 
Symbol 
ID4033200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp3187782 
End bp3188408 
Gene Length627 bp 
Protein Length208 aa 
Translation table11 
GC content64% 
IMG OID637971340 
Productthiamine-phosphate diphosphorylase 
Protein accessionYP_578122 
Protein GI92118393 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0352] Thiamine monophosphate synthase 
TIGRFAM ID[TIGR00693] thiamine-phosphate pyrophosphorylase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.511972 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGTATC CTGATCGCAG CGCGTATCCT GACCGCTTCT ATCCTGTCGT CGATACGCTG 
GATTGGGTAC GCCGCCTGAC CGGACTCGGC GTCGGCACGG TGCAGTTGCG CGCAAAAGAC 
CTCAACGACG GCGAGTCGCT GCAACTCGTC AGCGACGCGC TGCAGATCGT CAAGGACACG 
CCGACGCGGC TCGTGGTCAA CGACTACTGG CGCGCGGCGA TCGTGGCCGG CGCGAAGCAC 
GTTCACCTCG GCCAGGAGGA TCTCACGACG GCCGACGTCC ATGAGATCCG CAAAGCCGGG 
CTGACGCTCG GCCTTTCCAC CCATGACGAT GCCGAACTCG ATACCGCGCT CGCCGCCGAG 
CCGGATTATG TCGCGCTGGG GCCGATCTTC TTCACCACGC TGAAATCGAT GCGCTTCGCC 
CCGCAGGGCA TTCCGAAAAT CGCCGAGTGG AAGAAGCGCG TCGGCAACAT TCCGCTGGTC 
GCCATCGGCG GCATCAAGCT CGAGCAGGCG GCGGAAATTT TCGACGCCGG CGCGGACTCG 
ATCGCCGTGG TCAGCGACGT GACGCAGAAC CCCGATCCCG ACGCGCGGGT GAAGGCATGG 
CTCGAACAGG TGATTGAAAC CGCATGA
 
Protein sequence
MPYPDRSAYP DRFYPVVDTL DWVRRLTGLG VGTVQLRAKD LNDGESLQLV SDALQIVKDT 
PTRLVVNDYW RAAIVAGAKH VHLGQEDLTT ADVHEIRKAG LTLGLSTHDD AELDTALAAE 
PDYVALGPIF FTTLKSMRFA PQGIPKIAEW KKRVGNIPLV AIGGIKLEQA AEIFDAGADS 
IAVVSDVTQN PDPDARVKAW LEQVIETA