| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2862 |
|---|
| Symbol | |
|---|
| ID | 4029418 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 3153834 |
|---|
| End bp | 3154652 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637971305 |
|---|
| Product | lytic murein transglycosylase |
|---|
| Protein accession | YP_578090 |
|---|
| Protein GI | 92118361 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGAT ATGGTTTGGC CCTTACGGTC GGCGTCTGGC TCGCAGGCGG CTTGCTGGGT
GGCGCGGCGC AGGCCGCGCA ATGCGGCGGC GACTTCAACG GGTTTCTCTC CGCGATGTCG
CGGGAAGCCG CCGCGGACGG TATTTCGCAG GGCGTGATCT CGCAGGCGCT CGGCGGCGTG
CAGCAGGACC AGGCGGTGCT GAATTTCGAC CGGCGCCAGC GCGGCACCTT CCGCAAGAGC
TTCGAGCAAT ATGCCGCGAC CCGCGTCGGC GCCGGCCGCA TCAAGGGCGG GAAGGCGATG
CTCATGCGTC ACGCCTCGCT GCTGTCGCGG ATCGAAAAGC AGTTCGGCGT GCCGCCGGAG
ATTCTTGTCG CGATCTGGGG GCTGGAAAGC GATTTCGGCC GTGGCGACAT GGGCAAGCTG
CCGGTGTTTC GGGTGCTTGC CACCATGGCG CATGACTGCC GGCGCACGGA GCTGTTCCAG
CGCGAGCTTC TGGCGGCGCT CAAGATCGTA CAGCGCGGCG ACCTGCGCCT CAACGACATG
GTCGGCGCCT ATGCGGGCGA GATCGGGCAG ACCCAGTTTC TGCCCTCGTC CTACATCAAG
TACGGCGTCG ATTATGACGG CAACGGCCAT GTCGACCTGC GGCATTCGGT GCCGGACGTG
CTGGCCTCGA CCGCGAACCT TCTGAGGGCC AACGGCTGGA AGGCCGGCGG CGACTATCAC
CAGGGTTCGG CCAATTTCGA GGCAATGCGG GAATGGAATC GCTCCGAGGT CTACCGCAGG
ACCATCGGCT ATTTCGCCGA CAAACTGGCC GGACAGTAA
|
|---|
| Protein sequence | MLRYGLALTV GVWLAGGLLG GAAQAAQCGG DFNGFLSAMS REAAADGISQ GVISQALGGV
QQDQAVLNFD RRQRGTFRKS FEQYAATRVG AGRIKGGKAM LMRHASLLSR IEKQFGVPPE
ILVAIWGLES DFGRGDMGKL PVFRVLATMA HDCRRTELFQ RELLAALKIV QRGDLRLNDM
VGAYAGEIGQ TQFLPSSYIK YGVDYDGNGH VDLRHSVPDV LASTANLLRA NGWKAGGDYH
QGSANFEAMR EWNRSEVYRR TIGYFADKLA GQ
|
|---|
| |