Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2861 |
Symbol | |
ID | 4029417 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3151988 |
End bp | 3153253 |
Gene Length | 1266 bp |
Protein Length | 421 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637971304 |
Product | diguanylate cyclase |
Protein accession | YP_578089 |
Protein GI | 92118360 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2199] FOG: GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGGAACAA CCAGAAGAGG CGGGGCGGCG CGCGCTCCGA ACTCGCGGAT GCTGAGCGTA CCGACGCTGT GGGTCGTGTT CGTCGTGAAT TTCATGGCGT TGGGTCTGGT CTGGACCTAC GTCATGCGGA GCTATCCGAC GCTCGTGGCC GCACGATATT GGGCCTCGGC TGCCTACGTC GCCGCCTTTT TTACCGCGGT ATCGATGCTG CGCGGTCAAG TCGATTCAAT GCTGCCTCTG GTGTTCGGGG GTGGCGGGTT GATCTTTGCG ATCTGCATTT ACACGATGGG GATTCAACGC TTCTACGAGC GGCCCGTCTC CTGGCAAGCG ATGCTTGTCA CGGTCGGGTT GAGCGTCGCG GGACTGGCCT TTTTCCTGTA CGTGCACGAC GATATCCGGA TGCGCATTTT CATCTATTCG ACGGCTCAGG CAGTGCCGAT CGGCATGACG CTGAGGATCG TGCTGTCGCG CAGGGAAGGT CGCATCAATT CGGGAGCCCA ACTCGCGGCC ATCGTTAGCG TGCTCATCAT TTGCGTCAGC GCGGTCAGAT CGGTTTGTGC ATTTTTGAAC ATCGGCGGTG GAGTGTCCTA CGTCAACTTC AACGGCCTTC AGGCGGCTTT GATTTTAGGT CTCGTGTTCC TGTCGATGAC CTGGAATTTC GGTTTTCTGC TGATGGCGAT CGATCGGCTG CGCAATGAAG TTGCCGACCT CGCGCTGGTG GATGACCTCA CCGGCGTCGC CAACCGAAGG CAGCTGCTGG GGCGGCTGGA GGAGGCGTGC GCAATGTCGC AACGGAGCGG CGAACCTTTC GCGCTCCTCG TGATCGACCT CGACGGCTTC AAGCAGATCA ACGACACCCA TGGTCACGCC GCCGGCGATG CCTGCCTGCG GCATTTCACG CTGATGACGC AGATGCGGTT ACGGCCGGGC GATCTGCTGG CGCGAACCGG CGGTGACGAG TTTTGCATCC TCCTGCCGAC CACAACGCTG CGCGAGGGCG CAATGATCGC GCGGCGCGTG CTGGATGCGT GCCGTGAAGA CGCCGCCGGA TGCGCCGGCG CCGATGTCCC CATCGCGGCA TCGATCGGCG TCGCTCAATG GACAAAGGAG ATCGGAAGCT GTTCGGAGCG TCTGCTCGCC GCCGCCGATC ATGCCCTCTA CGCCGCCAAG AATCAGGGAA GAAACCGGTA TGCGAGCTGC GATTCCGCAC CATCGATCGT TCCGGATTTC TCGCCGGAGC AGGCGGCGCT GGATCAGAAG GCGTAA
|
Protein sequence | MGTTRRGGAA RAPNSRMLSV PTLWVVFVVN FMALGLVWTY VMRSYPTLVA ARYWASAAYV AAFFTAVSML RGQVDSMLPL VFGGGGLIFA ICIYTMGIQR FYERPVSWQA MLVTVGLSVA GLAFFLYVHD DIRMRIFIYS TAQAVPIGMT LRIVLSRREG RINSGAQLAA IVSVLIICVS AVRSVCAFLN IGGGVSYVNF NGLQAALILG LVFLSMTWNF GFLLMAIDRL RNEVADLALV DDLTGVANRR QLLGRLEEAC AMSQRSGEPF ALLVIDLDGF KQINDTHGHA AGDACLRHFT LMTQMRLRPG DLLARTGGDE FCILLPTTTL REGAMIARRV LDACREDAAG CAGADVPIAA SIGVAQWTKE IGSCSERLLA AADHALYAAK NQGRNRYASC DSAPSIVPDF SPEQAALDQK A
|
| |