Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2841 |
Symbol | |
ID | 4030736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3133607 |
End bp | 3135808 |
Gene Length | 2202 bp |
Protein Length | 733 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637971285 |
Product | helicase RecD/TraA |
Protein accession | YP_578071 |
Protein GI | 92118342 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.344384 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCGC AGCCGGAACC ATCAAGCCGG GAAGTTCTCG CGGGCCTTGT TGAGCGCGTC ACATACCACA ACGACGGGAA TGGCTACTGC GTTTTGCGGA TCAAGGCGCG CGGCCACCGC GAACTGGTCA CTGTAGTCGG GCATGCCGCG GTGATCTCCG CTGGCGAGTG GATTACCGCA TTGGGCGAAT GGGTCAATGA CCGAACCCAT GGCCAACAGT ACAGGGCGAA GTTCTTAAAG ACCTCGGAAC CGACATCACT CGACGGTATC GAGAAATACC TCGGCTCCGG GATGATTCGC GGCATCGGGC CAGTCTATGC CAAGAAGCTG GTGCGCGCCT TCGGTGAGAA GGTGTTCGAT ACCATCGAGG CGGAGCCCGA ACGCTTGCGC GAGGTAACGG GCATCGGCCC GGTTCGGGCC TACCGCATTG CAGCCGCTTG GGCCGAACAG AAGATCGTTC GCGAAATCAT GGTCTTCCTG CACAGCAATG GCGTCGGCAC AGCGCGGGCG GTGCGCATTT ATAAGACCTA TGGCGCCGAC GCCGTACAGG TCATGACCGA GAACCCCTAC CGCCTCGCGC GTGACATTCG CGGCATCGGC TTCAAGACTG CCGACGCGAT CGCGATGAAA CTCGGCATCG AGAAGACCGC AATGATCCGG ATTCGGGCCG GAATCTCCTA TGCGCTGACC GAGGCGATGG ACGAAGGGCA CTGCGGTCTG CCGACGGATG AGCTGGTGCC GCTTGCCGAG AAGCTGCTTG AGGTCCCGGT GGAACTAGTG CGCATCGCGC TTGATCTCGA ACGAACAGAA GGCACGGTCA TCGCGGACAG TGTAGGCGAA ACGTCCTGCG TATTTCTGGC GGGCCTGCAT CGGGCGGAGC GCTCGATTGC CGAGCGGCTG ATCCGGCTCG CGAACGGCAC ACTGCCCTGG CCCTGGATCA ATCCAGACAA GGCACTGCCT TGGGTCGAGG AACGGATCGG GCTTACCCTT GCTGGGAGCC AGATGGCTGC GATCCGGCTC GCATTGATGT CCAAAGCGTT GGTCATGACC GGCGGTCCTG GTGTCGGCAA GACCACCATC GTCAAAGGTA TTCTCCGTAT TCTCGCAGCA AAGGGGGCAA GGCTCCTGCT ATGCGCGCCG ACCGGCCGCG CCGCCAAGCG CATGACCGAG GCGACCGGTT TTGAGGCCAG GACGATCCAC CGGCTGCTGG AGGTTGACCC CAAGGGCGGC GGCTTCAAGC GCGGCGAAGA CAATCCGCTC GACTGCGACC TGCTTGTTGT CGACGAAGCC TCAATGGTAG ACGTCATGCT GATGCAGTCA CTCATCAAGG CAGCGCCAGA CAAGTCTGCC CTTTTGATCG TCGGCGACAT CGACCAGCTT CCTTCGGTTG GGCCAGGCCA AGTGCTGGCC GACGTCATTT CATCCGGTGC TGTGCCGGTG GTGCGTCTCA CCGAGGTGTT CCGGCAGGCC GCGCAAAGCC GCATCATCAT CAGCGCACAT CGCATCAATC ACGGGGTCAT CCCCGATCTC AGCCTGCCCG GCACGGATAG CGATTTCTAC TTCGTGCAAG CGGACGATCT AGAAACCGTC GTACAGCGCA TTATCGAGTT GGTGAAGACA CGGATCCCCA ATCGCTTCGG CCTCGACCCA ATTCGGGACA TTCAGGTTCT GTGTCCAATG AACCGGGGCG GCGTCGGTGC GCGCTCGCTA AACATCGAAC TGCAGACGGC TCTGAACCCC GCCGGCGAGC GCAAGGTCGA GCGCTTTGGT TGGACGTTCG CGCCCGGCGA CAAAGTGATG CAGATCGAAA ACGATTACGA CAAGGAGGTC TATAACGGCG ACATCGGCTA TATCGACGAT GTTAGTTTCG AAGACAGCGA ACTCACCGCA AGCTTCGACG GCCGCACGGT CATTTATGGG TTTGGCGAGC TCGACACGCT GGTGCCGGCC TACGCAGCAA CCATCCATAA GAGCCAGGGT TCGGAATACC TCGCCGTTGT GATCCCGGTG ATGACGCAGC ATTACACCAT GCTGCAGCGG AACCTGCTCT ATACCGGCGT CACCAGGGGC AAGAAGCTGG TCGTGCTGGT CGGTCAGAAG AAGGCCGTCG CCATCGCGGT TCGGAACGTT TCGGGGCGAA GGCGGTGGTC GAAGTTGAAC GAGTGGCTGG TATCAAGAAC ATTGTCGATG CCGATAAGAT GA
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Protein sequence | MKPQPEPSSR EVLAGLVERV TYHNDGNGYC VLRIKARGHR ELVTVVGHAA VISAGEWITA LGEWVNDRTH GQQYRAKFLK TSEPTSLDGI EKYLGSGMIR GIGPVYAKKL VRAFGEKVFD TIEAEPERLR EVTGIGPVRA YRIAAAWAEQ KIVREIMVFL HSNGVGTARA VRIYKTYGAD AVQVMTENPY RLARDIRGIG FKTADAIAMK LGIEKTAMIR IRAGISYALT EAMDEGHCGL PTDELVPLAE KLLEVPVELV RIALDLERTE GTVIADSVGE TSCVFLAGLH RAERSIAERL IRLANGTLPW PWINPDKALP WVEERIGLTL AGSQMAAIRL ALMSKALVMT GGPGVGKTTI VKGILRILAA KGARLLLCAP TGRAAKRMTE ATGFEARTIH RLLEVDPKGG GFKRGEDNPL DCDLLVVDEA SMVDVMLMQS LIKAAPDKSA LLIVGDIDQL PSVGPGQVLA DVISSGAVPV VRLTEVFRQA AQSRIIISAH RINHGVIPDL SLPGTDSDFY FVQADDLETV VQRIIELVKT RIPNRFGLDP IRDIQVLCPM NRGGVGARSL NIELQTALNP AGERKVERFG WTFAPGDKVM QIENDYDKEV YNGDIGYIDD VSFEDSELTA SFDGRTVIYG FGELDTLVPA YAATIHKSQG SEYLAVVIPV MTQHYTMLQR NLLYTGVTRG KKLVVLVGQK KAVAIAVRNV SGRRRWSKLN EWLVSRTLSM PIR
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