Gene Nham_2832 details

Gene Information

• Locus tag: Nham_2832
• ID: 4032474
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: +
• Start bp: 3122240
• End bp: 3124165
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 637971277
• Product: hypothetical protein
• Protein accession: YP_578063
• Protein GI: 92118334
• COG category: [S] Function unknown
• COG ID: [COG3513] Uncharacterized protein conserved in bacteria

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 0.292784
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCACAAAA GGAACTCAAG ATCGTATCGC CTCGGACTGG ACCTCGGCTC CAACTCTCTC 
GGCTGGTTCG TCACCCATCT TGAGAAACGC GGCGACCGTT ATGAACCTGT CGCGCTCGAT 
CCCGGCGGTG TCCGTATTTT CCCCGATGGC CGCGACCCGC AATCGGGCAT GTCCAACGCC 
GTCGATCGCC GGATGGCGCG GGGCGCGCGC AAGCGGCGCG ACCGCTTCGT CGACCCCTAT 
GCATTGCGCA AGGCCGCGCT GACAAACGCC CTGCCTGCGC ATCGCGTCGG CCGCGCTATT 
TTCCACCTCA ACCAGCGTCG CGGATTTCAA TCCAATCGTA AAACCGACCG CAAGCAGAGC 
GAGGACGGCG CCATCAAGCA GGCGGCCTCG AAACTGAAGG CGAGAATGCA CGAGGAAGCC 
GCACCGACAC TCGGCGCATT CTTCGCTGAC ATGCACCTGC GCAAATCCTA TGACGACCAG 
CAGACTGCGA TCCGCGCCGA ACTTGTGCGG CTCGGCAAGG ATCACCTCAC CGGCAACGCC 
CGCAAGAAGG TCTGGGCCAA GGTTCGCAAG CGTCTGTTCG GCGATGAGGT GCTGCGGCCG 
AAGGATACCT CGGACGGTGC GCGCGCCCGC GCCACCACCA CCGGCACCAA GGCGAGCTAC 
GACTTCTATC CGACCCGCGC GATGCTGCTG GATGAGTTCA ATGCCATCTG GGCGGCGCAG 
CGCGAACACC ACCTCGCGAT GACGGACGAG GCGAAGGCGG AGATCGAGCA CATCATCTTC 
TACCACCGCC CGCTGAAGCC TGCGATTGTC GGCAAATGCA CGCTCGACCC CGCAACGCGC 
CCCTTCAAGG AAGACCCCGA AGGCTATCGC GCACCGTGGT CCCATCCTTT GGCGCAGCGA 
TTTCGTATTC TCTCGGAGGC GCGCAACCTC GAAATCCGCG AAACCGGCAA AACCTCGCGC 
AGGCTGACCA AGGACCAGAG CGATCTCGTC GTGGCGGCGC TGCTCGCCAA CAGGGAAGTG 
AAATTCGACA AGCTGCGCAC CCTGCTCAAG CTTCCGGCGG AAGCCAGGTT CAATCTTGAA 
TCAGACCGGC GCTCGACGGC GACCAGACCG CCGCACGGCT GTCGGACAAG AAGAGCTTCA 
ATAAGACGTG GTGCGGGTTT CCTCCGGAAC GGCAGATCGC GATCGTCACC AGACTGGAAG 
AAACCGAAGA CGAAAACGAA CTGCTCGCAT GGCTCAAAAT GGAATGCGCA CTTGACGGCG 
CAGCGGCCGC GCGCGTCGCC AATACGACGC TGCCGGACGG CCATTGCCGG CTCGGCCTGC 
GCGCAATCAA AAAGATCGTG CCGATCATGC AGGACGAGTT CGATGAGGAT GGCGTTGCGG 
GCGCCGGCTA TCACATCGTG GCCAAGCGTG CCGGCTACCA CCATTCCCGT CGACACATTC 
CAACAAGGCG GCAACGCCTT CGGTCGAATA TTGAGCGTTG TGACCATCGA ACTATTCGCG 
ATCACCGACC GCGTCGATCC CGTCCAGGAA CAGGATGCTC GGTGCTTTGC TCTTCGCATC 
GCTGAATGCC GATCTGATGG CCTGCAGCAT TTCGCCGAGG TGTCGCTTGG CCTGCCACCG 
CGCAATGCTG CCCAGGATCA ACGGCACTCC GCAGGTCTTT GCCAAAGCTC TTGCGTAGGT 
CGTTTTGTAC CGGGGACACC ATGCAGGAGA ACGCCGCGAT CCACGTCACT CCACGGCAAG 
GAGCCTTCGG CCCACGCCTT CGGGTCAACG GCCAGATCGC GTCCCCAACT GCCTGCCTCG 
CCGAGGCCAT GCATGTCGTT CAGGGACGGC ACCTCGTCAT CTCCGGCACG CATGCCGGAG 
ACTTTGGACC GATGTGCCAT CAGCCGCTCC AACCGATCGA GCGTTTGCCG GGCGGAGCGC 
CTCTGA 

 

Protein sequence

MHKRNSRSYR LGLDLGSNSL GWFVTHLEKR GDRYEPVALD PGGVRIFPDG RDPQSGMSNA 
VDRRMARGAR KRRDRFVDPY ALRKAALTNA LPAHRVGRAI FHLNQRRGFQ SNRKTDRKQS 
EDGAIKQAAS KLKARMHEEA APTLGAFFAD MHLRKSYDDQ QTAIRAELVR LGKDHLTGNA 
RKKVWAKVRK RLFGDEVLRP KDTSDGARAR ATTTGTKASY DFYPTRAMLL DEFNAIWAAQ 
REHHLAMTDE AKAEIEHIIF YHRPLKPAIV GKCTLDPATR PFKEDPEGYR APWSHPLAQR 
FRILSEARNL EIRETGKTSR RLTKDQSDLV VAALLANREV KFDKLRTLLK LPAEARFNLE 
SDRRSTATRP PHGCRTRRAS IRRGAGFLRN GRSRSSPDWK KPKTKTNCSH GSKWNAHLTA 
QRPRASPIRR CRTAIAGSAC AQSKRSCRSC RTSSMRMALR APAITSWPSV PATTIPVDTF 
QQGGNAFGRI LSVVTIELFA ITDRVDPVQE QDARCFALRI AECRSDGLQH FAEVSLGLPP 
RNAAQDQRHS AGLCQSSCVG RFVPGTPCRR TPRSTSLHGK EPSAHAFGST ARSRPQLPAS 
PRPCMSFRDG TSSSPARMPE TLDRCAISRS NRSSVCRAER L