Gene Nham_2828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2828 
Symbol 
ID4032470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3114919 
End bp3116592 
Gene Length1674 bp 
Protein Length557 aa 
Translation table11 
GC content63% 
IMG OID637971273 
Producthypothetical protein 
Protein accessionYP_578059 
Protein GI92118330 
COG category[S] Function unknown 
COG ID[COG4461] Uncharacterized protein conserved in bacteria, putative lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.899686 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCCGGC ATACGGTTGT TTCGGCAGTC ATGTGCTGCG CCCTGATGTT GCTGCCGACA 
GCTCTAGCGA ACGCTTCCGG TCCGGGTTTC GACTGCGCCA AGGCGACGCG CCAGATCGAC
AAGGCGATCT GCGCATGGGA CACGGTGGGG TCGCTCGATG GGCGCATGGC GACGGCTTAC
ACGAAGGCGA TTGCTGCCCA CAATGACGAA GCCGCCATCG CTTCGGTCAA GGCCGACCAG
AAGGCATGGC TCAGCGAGCG CGACCGCCGC TGCGCGCTGA AGACCGTGAA GCCGAAGGAA
GGCAGCGAGG ACGGATTGAG CCCGCAGCAA TTCGGGCAGC TTATGTGTCT CCAGTCCATT
TATCCGCCGC GGATCGCGCA GCTCATGGAT CTCGCCGCGC CGCCTCTGGC GCCGCTCGAT
GTCAAGATGG TGCCGATCGA ACCGTTGAAG GCAGCCTATC CCGACGATTG GCGGCAACCC
GGCTACCAGG CCGCCTTTTC GCCTGACAAG ACCCTGATGG CTTTAGGCGT CGAAGACAGC
GCCGGCTATG TCAAGCAGGT CTGGCTCTAC CAGCCGGCAA GCGGGCGGCT GGCCGTCGCC
TCGCCGCAAA CCGATGGTGA CAGGACGGAT ACGCCGAAGG ATATTTCCGA GCTGAATTTA
TGGATCTGGG GCGATGACGG CCGTTTCTAC GTGCGCGCCC GCCGGCCGCT TGGCGAAGAC
AGCGTGTTCG GCGCCGATAT GAATGGCTAT GCCGAGATGC GGGAGCTGCC AGCCGACGTG
GTCGCGAAAA TCGCAGCCCA GGACGCCGCC CATAAAGCGG CAATCTACGA CCCAAACGCC
CCCAAGCCAA AACGGCCGCC CGGCTTCAAC GACGACAGCT ACAACAAGCA GGATGGCGGC
TCCTTTACCA CCTGGGCTCA GAACAAGGGA CACGGCTCCT TCGACCTGAA GGCCGCGCGC
GCCGGCGACG AGGAGCCGCG CATGATTGCC TCCGGCGGCT GGGAGATCGA GAATTTTCAG
TTCGATCCGG GCGGCACCAG GGTGTTCTAC AATGGCGAGG GCGGGCTTGT CGTCACCGAC
CCCGATACTC AGGCTACCCG CCGCCTCAAG GGCACGCGCG GCGGGGCGCT TGAAGTGAGG
CCAATCAACA TGTCGGCTGA TGGCGACATC CTCGTTTATT GGGCCCGCGG CACCTGCATG
AGCGACGCCG CCGATGAAAT CAACCCGGAT GCGGATGACG ACAGCATCAG GCGCGTGTGC
CTCGCCTATC TGGAAGCCGC CGGCAGCGCG CCAACTCCCA AGCCCATTTC CGGAACACTC
CCGGCAAAGG CAAATACCGC CCTCGCCGAT CCATGGGTCG GAAAATGGGC AGGCAGCGAC
AACAGCTCTC TCTCCGCCAC CATCAGGCGC GGCGCGGCCA AGCCGGACTA TCTGGTCATC
GATCTGGTCG CCGGAATGCC GGGCTGCTCG GGCGCCGTCA CACTTTATGG CAAGCCAAAG
GACAATGCGG TACTCGGCGA AAGCTATGAT CCGAATAATC GCGGCATCCC TGTCTGCCGC
GTCGAGCTGT CGCTCGACAG GAAGGGAGTG CTGACGACTG AAGTGGTCGG ACCGTGTACC
TTTTATCACG GTGGCTCTTG CGGCTTCGAC GGCAGCATGA CACGGAGCGA GTGA
 
Protein sequence
MIRHTVVSAV MCCALMLLPT ALANASGPGF DCAKATRQID KAICAWDTVG SLDGRMATAY 
TKAIAAHNDE AAIASVKADQ KAWLSERDRR CALKTVKPKE GSEDGLSPQQ FGQLMCLQSI
YPPRIAQLMD LAAPPLAPLD VKMVPIEPLK AAYPDDWRQP GYQAAFSPDK TLMALGVEDS
AGYVKQVWLY QPASGRLAVA SPQTDGDRTD TPKDISELNL WIWGDDGRFY VRARRPLGED
SVFGADMNGY AEMRELPADV VAKIAAQDAA HKAAIYDPNA PKPKRPPGFN DDSYNKQDGG
SFTTWAQNKG HGSFDLKAAR AGDEEPRMIA SGGWEIENFQ FDPGGTRVFY NGEGGLVVTD
PDTQATRRLK GTRGGALEVR PINMSADGDI LVYWARGTCM SDAADEINPD ADDDSIRRVC
LAYLEAAGSA PTPKPISGTL PAKANTALAD PWVGKWAGSD NSSLSATIRR GAAKPDYLVI
DLVAGMPGCS GAVTLYGKPK DNAVLGESYD PNNRGIPVCR VELSLDRKGV LTTEVVGPCT
FYHGGSCGFD GSMTRSE