Gene Nham_2820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2820 
Symbol 
ID4032462 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3106305 
End bp3107825 
Gene Length1521 bp 
Protein Length506 aa 
Translation table11 
GC content67% 
IMG OID637971265 
ProductL-aspartate oxidase 
Protein accessionYP_578051 
Protein GI92118322 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0029] Aspartate oxidase 
TIGRFAM ID[TIGR00551] L-aspartate oxidase 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCATGACG CCAACGGCGC CGTCGTCGTC ATCGGCGGGG GCCTGGCCGG CCTGATGACG 
GCCCTTGGGC TGGCGCCGCG ACCGGTGCTG CTTTTGAGCA GCGCATCATT GGGATTCGAA
ACATCGAGCA TCCTCGCGCA AGGCGGCATC GCCGCCAGCA TCGGGCCGGA TGACGACGCC
TCGCTGCATC TGGCGGACAC CCTCGCCGCC GGAGACGGCC TTTGCGACGA AAGCGTTGCC
GCGGCAATCC TCAGTGGCGC GCCGGCTGCC ATCGAACGGC TGTCGCAGCT CGGCGTGGCG
TTCGATCGCG ACGCCGACGG CAACCTCGCG CTTGGCCTCG AGGCGGCCCA CTCGCGCCGC
CGGATTATCC ATGCCGGAGG TGACGCGAGC GGCCACGACA TCATTCGCAC CCTGGTCCGC
AAGGTCTATG AGACACCTTC GATCACCGTA TGCGAGGCGA CCCGTGCGCA GCGTTTGATC
GTCGAAGACA ATACGGTGAG AGGGGTCGTC TGCCAGACTG ACCGGGACCC CGTGGCTTTC
GCCGCCGACC ACATCGTCGT CGCGACCGGA GGCATCGGCG GATTGTTTCT GCATGGGACC
AATCCGGCGG GATCCTGCGG TCAGGGCCTC GCGCTGGCAG CGCGGGCCGG CGCGATCATG
GCCGATCTCG AATTTATCCA ATTCCATCCG ACGGCACTCG ACACCGGCTC CTTCCCGCTG
AAACTGATCA GCGAGGCCGT GCGCGGCGAA GGGGCGACGC TCATTGACGA AAATGGCGAT
CGCTTCATCG CTGACACGCC CGGCGCCGAG CTTGCGCCCC GCGACGTCGT CGCGCGCGCC
GTCTGGCGGC ATATGGCGGC GGGCCATCGC GCCTTCCTCG ATGCGCGCGA TCTGCAAGGG
ATCGACTTCG CCCGACGCTT CCCCGCGATC ACCTCGTTTT GCCGCGACGC GGGAATCGAT
CCGGCAACGC AGCCGATCCC GGTCCGTCCC GCCGCACATT ATCACATGGG TGGAATTGCC
GTCGATAAAC GCGGAAGGAC GTCCATTGAC GGTCTGTGGG CATGCGGTGA AGTCGCCTGC
ACGGGCCTTC ATGGCGCCAA CCGGCTGGCC AGCAACTCGC TTGTCGAGGC GGTAGTGTGC
GCCGGCCTGG TCGCCCAGGA CATCGCCGGC ACGGCATCCA CGAAAAAGCG TTACCCCAGG
ACTCCGGATG GAGGCGGCGG CGGCGATCCG ACCTTGATCC GGCCGATCCT GTCGCGTGCT
GCCGGGGTGT TGCGCGACGG CGACGGATTG CGCGCAGCCG CGCGCGCCCT CTCACCGCTT
GCTGCCTCGC AACAGGCCGC AAGCGACCCG GCCATCGTCG CTCTGATGAT CGTGATCGCC
GCGCTGCGCC GTGAGGAAAC CCGCGGCGCG CATGCGCGTA CCGACTTTCC CGAGCGAGCA
ATCCGCGCGG AACGTGCGAC ACTTCGCCTC AGCGATGCGC TCGACGCCGC ACAAGACTAC
ATCGCCGATC CGGTCAACTA G
 
Protein sequence
MHDANGAVVV IGGGLAGLMT ALGLAPRPVL LLSSASLGFE TSSILAQGGI AASIGPDDDA 
SLHLADTLAA GDGLCDESVA AAILSGAPAA IERLSQLGVA FDRDADGNLA LGLEAAHSRR
RIIHAGGDAS GHDIIRTLVR KVYETPSITV CEATRAQRLI VEDNTVRGVV CQTDRDPVAF
AADHIVVATG GIGGLFLHGT NPAGSCGQGL ALAARAGAIM ADLEFIQFHP TALDTGSFPL
KLISEAVRGE GATLIDENGD RFIADTPGAE LAPRDVVARA VWRHMAAGHR AFLDARDLQG
IDFARRFPAI TSFCRDAGID PATQPIPVRP AAHYHMGGIA VDKRGRTSID GLWACGEVAC
TGLHGANRLA SNSLVEAVVC AGLVAQDIAG TASTKKRYPR TPDGGGGGDP TLIRPILSRA
AGVLRDGDGL RAAARALSPL AASQQAASDP AIVALMIVIA ALRREETRGA HARTDFPERA
IRAERATLRL SDALDAAQDY IADPVN