Gene Nham_2808 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2808 
Symbol 
ID4030645 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3093903 
End bp3094601 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content63% 
IMG OID637971253 
ProductABC transporter related 
Protein accessionYP_578039 
Protein GI92118310 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.491763 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCTGC TCGAGGTCAA CGGTCTGAAC AGCTATTATG GGGATTCCCA TATCCTCTTC 
GATGTCTCGA TGCGTGTCGA GCGCAACGAG GTCGTGGCGC TGCTCGGGCG CAACGGCGCC
GGCAAGAGCA CCACGCTAAA GAGCCTGATG GGCGTAGTCA CGCCACGGGC CGGCAGCGTG
ATATTCGACG GCACCGACGT TGCAGGCCGC AAGAGCCACA AGATCGCGCA GGCCGGAATG
CAGCTCGTGC ATGAGGAGCG CCGCATTTTC GGCAGCCTCA GCGTCGAGGA AAACATTGTG
CTCGCGGGGC TGACGGCTTC GAAACGCTGG CCGCTCAATC GCATCTATGA GATGTTTCCC
CGGCTGAAGG AGCGGCGGAA CAATCGCGGC AACGAGCTGT CCGGCGGCGA GCAGCAGATG
CTGGCGATCG CGCGCGCGCT GATCCGCGAT CCCAAGATCA TCCTGCTCGA CGAGCCGTTC
GAGGGGCTCG CGCCGGTGAT CGTGAAAGAT CTCATGAAGG CCTGCCGCGA TCTGGCTGCC
GCCGGTCAGA CCATCGTGCT GGTGGAGCAG AACCTGGCGG CAACGCTCGC GCTCGCCCAG
CGCATCTATA TCATCAACAA CGGCCATATC GTGCATGAGG GGCCGGCCCG GGAACTCAAG
GCGCAGCCGG ACATCCTGCA ACGCTACCTC GGCGTTTAG
 
Protein sequence
MSLLEVNGLN SYYGDSHILF DVSMRVERNE VVALLGRNGA GKSTTLKSLM GVVTPRAGSV 
IFDGTDVAGR KSHKIAQAGM QLVHEERRIF GSLSVEENIV LAGLTASKRW PLNRIYEMFP
RLKERRNNRG NELSGGEQQM LAIARALIRD PKIILLDEPF EGLAPVIVKD LMKACRDLAA
AGQTIVLVEQ NLAATLALAQ RIYIINNGHI VHEGPARELK AQPDILQRYL GV