| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2801 |
|---|
| Symbol | |
|---|
| ID | 4030638 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 3087967 |
|---|
| End bp | 3089271 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 637971246 |
|---|
| Product | O-antigen polymerase |
|---|
| Protein accession | YP_578032 |
|---|
| Protein GI | 92118303 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGAA CATCTCCCGC ACGAATTGGA GCGCGCGGAC ACCACATTCG ATCAGAGCAG
AGATGGGATG GCCTTGTGAT CAATCTGCGC CTCAGTCCGG CGACCGCACT TCGAAATCTC
GATATTTTGG CCGTATTGAT CGCCGCGTCG CTGCCGTGGT CAACCTCGCT GCCTGCCATC
TTCGCTGTTA TATGGCTCTT CGCGCTGGTG CCAACGATCG AGCCCACTTT GCTGCAATTG
TTCAAGCGCC CGATCTGCAT TCTACCGGTC GCATTCTTCG TGCTGGCCTT GGCTGGTACG
TTGTGGTCAA GCGCGCCGTG GACCGCACGA CTACACGCCG TCGGGCCGTT GGCCAAACTG
CTCGTCATTC CCCTCCTCAT TTATCATTTT CGACGTTCGT CCCGGGGACA ATGGGTGTTC
ACCGCATTTT TGGTGTCATG CGCGCTTCTG ATGATCATGT CGTGGATCGT CGCCTTTGAT
CCGCGGCTTG CCCTCAAATC CGGCGCGTAT TACGGGGTTC CGATCAAGAA CTATATCGAC
CAGAGCCAGG AATTTGCGCT GTGCGCGGTA GCCTTGGCCT ATCCTGTTGT GCACCTCTTA
CTGCAAAAAC GGATTAAGGA GGCCGCATTA CTTCTCATAG TCGCCGTGAG TTTTGTTGCG
AACATGATGT TCGTCGTGGT CTCGCGAACG GCTTTGGTAA CGATGCCGGT TATGCTCGGC
ATATTCATGT TTTTGCATTT GACGCCCCGA CGCATGATCG CCGTCTCATG CACAACTCTC
CTTGCCGGCG TTGTGATGTG GTTTGCGTCC CCTTCTCTGC AATCCCGAGT CGCCAGCTTT
TCCTCACAAT ACGATCAATA CGAAACTTCG GACCAGGCAA CCTCGATCGG CTTGCGGCTA
GAGTTTTGGC GCAAGTCGCT GCGTTTTTTT GTAGACGCTC CTCTCGCAGG ACATGGAACG
GGATCGGTTC AGGGCCTTTT TACCGCCGCC GCCGTGGGTC AGACGGGTGC AGCCGCGGAG
GTCGTCAACA ACCCGCATAA CCAAACGCTT AACGCGGCGG TACAGTGGGG GAGCCTGGGG
ATTTTAGTGC TCTACGCGAT GTGGTTATTT CATCTATCAC TTTTTCGCGG CACTAGTTTG
GCCGATTGGG TCGGCCTGTT GGTTGTGGCT CAAAACATGA TGACATCCCT CTTTAACTCT
CACTTATTCG ATTTCCATGA AGGATGGATG TATGTCCTTG GCGTGGGAGT TGCCGGGGGG
ATGGTGCTGC AAACGCGAGC CGTCGAAATT TCGAGCCGCT CTTGA
|
|---|
| Protein sequence | MNRTSPARIG ARGHHIRSEQ RWDGLVINLR LSPATALRNL DILAVLIAAS LPWSTSLPAI
FAVIWLFALV PTIEPTLLQL FKRPICILPV AFFVLALAGT LWSSAPWTAR LHAVGPLAKL
LVIPLLIYHF RRSSRGQWVF TAFLVSCALL MIMSWIVAFD PRLALKSGAY YGVPIKNYID
QSQEFALCAV ALAYPVVHLL LQKRIKEAAL LLIVAVSFVA NMMFVVVSRT ALVTMPVMLG
IFMFLHLTPR RMIAVSCTTL LAGVVMWFAS PSLQSRVASF SSQYDQYETS DQATSIGLRL
EFWRKSLRFF VDAPLAGHGT GSVQGLFTAA AVGQTGAAAE VVNNPHNQTL NAAVQWGSLG
ILVLYAMWLF HLSLFRGTSL ADWVGLLVVA QNMMTSLFNS HLFDFHEGWM YVLGVGVAGG
MVLQTRAVEI SSRS
|
|---|
| |