Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2793 |
Symbol | |
ID | 4031051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3078601 |
End bp | 3080172 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637971241 |
Product | transposase IS66 |
Protein accession | YP_578027 |
Protein GI | 92118298 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3436] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0349663 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATCGAA CCGGCGATCC GAGCGTTGAA GTGCTGTTGG CTCGCATCGC TGCGCTGCAG GCGGACAACC GTCAGCTCAC GGAGCGCGTC GTCAAGCTCG AGGAAGAACT GGCGCTGGCA CGCCTGCATC GTTTTGCGCC ACGCAGCGAA AAGCACGTCG ATCGTCTCTT CAATGAAGCC GAGCAGGCGG CCGTCGCGGA TCGCGCCGGC AGCGAAGAGT GCGATGTCGT CGAACCTCCG GACACAGGTT TGCCACCCGC CGAAAGCACG ACGGGGAAGA AACGTGGCCG CAGACCGCTG CCGGAAAACC TGCCGCGCGA GCGCGTCGAG TATGACCTTC CCGACGACCA GAAGGCGTGT CCTTGCTGTC GTGGCCGGAT GCATCGCATG GGCGAAACCG TTACCGAACA GCTTCATATC GAGGTGAAGG CGAAGGTCCT GCAGAATGTT CGCTTCAAAT ATGCGTGCCG TCATTGCGAC CGCACCGGGA TCAACACGCC GGTCGTGATC GCGCCGATGC CCGCACAACC CTTGCCGGGC AGCATCGCCA CGGCCTCAAC GCTGGCGTTC GCGCTGGTTC ACAAGTATGT CGACGGCACG CCGCTCTACC GGCTGGCGCA GGCCTTCGAG CGCGCCGGTG TTCCTGTCAG CCGTGGCGCT CTGGGCCACT GGGTGATTGG CTCGAGCGAA AAGCATCTGT CCCGAATCTA TGACGCGCTG AAGCTGCGGC TCCGATCGCA GCCCCTCATC CATGGTGACG AGACGACTGT TCAGGTCCTG AAGGAAAAGG ATCGGGAGGC CGCCAGCATG TCATATATGT GGGCATACCG GAGCGGCGAG GACAGTGACG AGCCGATCGT GCTGCTCGAT TATCAGCCGG GCCGCGGCCA AATACACCCG CAGACCTTCC TCGGCGATTA CCGCGGCATA GTGATGAGCG GCGGCTATTC CGCCTGGCGC ACGCTGGAAG GGGCCACCCA CATTGGATGC ATGGCCCATT CGAGGCGGCG CTTCGTCGAT GCCCTAAAGG CGAGAAAGAA AGGCGGCGGC CCGCCGGAAC AGGCGCTCCG GTTCTTCGAA CAACTCTACC GGGTTGAAAG GCAGGCGCGG GACAAAAAAC CGGACAAAGG CGAAATGCCA GATCAATGCA TTCGCCGCTT CCGCCAGCAA CACAGCATTC CCGTCCTGAA TGCTCTCAAG AAATGGCTCG ATCAAATCGC CCCGAGGGTC TTGCCGGACA GCAAGCTTGG CGACGCCGTA TCCTACACCC GAAACCAATG GGATTATCTG ACGCGCTACA CCGAAGACGG CAGGATGCCG ATCGATAATA ATCTTCTGGA GCGCGATATC AGAATCTTTG CCACTGGCCG GAAAAGTTGG TTGTTCAGCG ATACCGTTGA GGGCGCCAAG GCCAGCGCCA TCGTCTACAG CTTGGTGCTG ACCTGCCGCG CCTGTGGCGT CGAGCCGTTA GCGTGGTTGC GCCACGTTCT CACCGAGTTG CCTCAGCGCG CGGGCGACGC CGATATTACC GACCTGCTGC CCTTCAACCT CCCCAAAACC GCCACTGCCT GA
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Protein sequence | MNRTGDPSVE VLLARIAALQ ADNRQLTERV VKLEEELALA RLHRFAPRSE KHVDRLFNEA EQAAVADRAG SEECDVVEPP DTGLPPAEST TGKKRGRRPL PENLPRERVE YDLPDDQKAC PCCRGRMHRM GETVTEQLHI EVKAKVLQNV RFKYACRHCD RTGINTPVVI APMPAQPLPG SIATASTLAF ALVHKYVDGT PLYRLAQAFE RAGVPVSRGA LGHWVIGSSE KHLSRIYDAL KLRLRSQPLI HGDETTVQVL KEKDREAASM SYMWAYRSGE DSDEPIVLLD YQPGRGQIHP QTFLGDYRGI VMSGGYSAWR TLEGATHIGC MAHSRRRFVD ALKARKKGGG PPEQALRFFE QLYRVERQAR DKKPDKGEMP DQCIRRFRQQ HSIPVLNALK KWLDQIAPRV LPDSKLGDAV SYTRNQWDYL TRYTEDGRMP IDNNLLERDI RIFATGRKSW LFSDTVEGAK ASAIVYSLVL TCRACGVEPL AWLRHVLTEL PQRAGDADIT DLLPFNLPKT ATA
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