Gene Nham_2779 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2779 
Symbol 
ID4031037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3064731 
End bp3065522 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content56% 
IMG OID637971230 
ProductABC transporter related 
Protein accessionYP_578016 
Protein GI92118287 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCCAAAG CATCGATCGA AGCATCGCTA GGAGCGGCGT TGTCGCTTGA AAACGTCAGC 
GTTTCGTTTC CGATATATCA CGGCGGATCG CGGTCCTTGA AGAAGAGCCT GCTGTTTCGC
GGCTCGGGTG GCCAGCTTGC CACAGATGCC AACGATCGCA TTACAGTCGA AGCACTGCGA
CATGTTTCGT TGCAATTTGA GGTTGGTGAT CGCGTGGCGC TCATCGGATC GAATGGCGCT
GGTAAGACGA CGCTTTTGCG GGTTATGGCA GGCGTGTATG AACCTGTGAG CGGCACTGCC
CGTACGCGCG GACGGATCTC GCCGATGTTC GACATCAGTC TGGGCATAGA CAGTGAAATC
AGTGGCTATG ACAACATCCG TCTCCGCGGA CTTATTCTAG GGTTAAGTCC AGAAGAGATC
GAGGAGCGCA TGGCGGATAT CGTCGAATTC ACCGAGTTGG GCGACTATCT CGATATTCCA
GTCCGAACCT ATTCATCCGG CATGATGACG CGCCTGACGT TCGCCGTCGC GACGTGCTTT
GAGCCGGAGA TCTTGTTGAT GGACGAATGG ATCATGGCGG GCGATGCGGC CTTTTTGTCC
AAGGCCCAGC ACCGCGTCGA GACATTCGTC GAGAAGGCGA GCATTCTCGT CCTGGCATCA
CATAGCGCCG AGGTCCTAAA ACGCTGGTGT AACAAGGGTG TTCTGATGCA CAAGGGCGAG
GTTAGGTTCG AGGGTGAACT CGCCCAAACT CTTGACGCCT ATGCTGAGGT CACGTCTCGC
GACACTGTTT GA
 
Protein sequence
MSKASIEASL GAALSLENVS VSFPIYHGGS RSLKKSLLFR GSGGQLATDA NDRITVEALR 
HVSLQFEVGD RVALIGSNGA GKTTLLRVMA GVYEPVSGTA RTRGRISPMF DISLGIDSEI
SGYDNIRLRG LILGLSPEEI EERMADIVEF TELGDYLDIP VRTYSSGMMT RLTFAVATCF
EPEILLMDEW IMAGDAAFLS KAQHRVETFV EKASILVLAS HSAEVLKRWC NKGVLMHKGE
VRFEGELAQT LDAYAEVTSR DTV