Gene Nham_2740 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2740 
Symbol 
ID4029812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp3021052 
End bp3021972 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content60% 
IMG OID637971193 
ProductABC transporter related 
Protein accessionYP_577979 
Protein GI92118250 
COG category[V] Defense mechanisms 
COG ID[COG1131] ABC-type multidrug transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGCCCA TCATTTCCGT TTCCGGCCTG TCGAAGACCT ACGCGTCCGG CTTCACAGCG 
CTGAAAGCCA TCAACCTCGA TATCAACCGA GGTGAGATTT TTGCATTGCT GGGCCCCAAC
GGCGCCGGCA AGACCACGCT CATCAGCATC ATTTGCGGCA TCGCGAACCC GTCGGCCGGA
CAGGTGCTGG TCGACGGTCA CGACATTCAG CGCGACTTTC GGGCTACCCG CTCGCTGATC
GGCCTCGTGC CGCAAGAACT GCATACGGAT GCGTTCGAAA CGGTGTGGGC GACCGTCAGT
TTCAGCCGCG GGCTGTTCGG CAAACGCAAG AACCCGACTC ATATCGAGAA GGTTTTGAAG
GACCTGTCGC TGTGGGACAA GAAGGACAAC AAGATCGTCA CGCTGTCCGG CGGCATGAAG
CGACGCGTGA TGATTGCGAA AGCACTGTCG CACGAGCCGC AGATTCTGTT TCTGGACGAG
CCGACCGCGG GCGTCGATGT CGAACTGCGC AAAGCCATGT GGGACGTGGT GCGGACGCTG
CGAGCCTCTG GCGTCACGAT TATCCTGACG ACGCATTACA TCGAGGAGGC CGAGGAGATG
GCCGACCGGG TCGGCGTCAT CAACAGGGGC GAAATCATTC TCGTCGAGGA AAAGACGGTG
CTGATGCAGA AGCTCGGCAA AAAGCGGTTG AAGCTTCATC TGCAAGGCAG GCTCGATGCC
GTACCTGCGC CGCTGGCGGC CTACAATCTC GAGCTTGCCG ATTGCGGCAC GGAGCTGATC
TACACCTACG ACACCCGGAG CCAACATACC GGCATCACCA GCCTGCTGGG CGAACTCCGT
GCTGCCGGCA TCAGGTTTTC CGACCTCGAT ACCACCCAGA GTTCGCTGGA AGACATCTTC
GTCAGTCTGG TGAGGGCCTG A
 
Protein sequence
MSPIISVSGL SKTYASGFTA LKAINLDINR GEIFALLGPN GAGKTTLISI ICGIANPSAG 
QVLVDGHDIQ RDFRATRSLI GLVPQELHTD AFETVWATVS FSRGLFGKRK NPTHIEKVLK
DLSLWDKKDN KIVTLSGGMK RRVMIAKALS HEPQILFLDE PTAGVDVELR KAMWDVVRTL
RASGVTIILT THYIEEAEEM ADRVGVINRG EIILVEEKTV LMQKLGKKRL KLHLQGRLDA
VPAPLAAYNL ELADCGTELI YTYDTRSQHT GITSLLGELR AAGIRFSDLD TTQSSLEDIF
VSLVRA