Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2732 |
Symbol | fumC |
ID | 4030166 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 3010539 |
End bp | 3011954 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637971185 |
Product | fumarate hydratase |
Protein accession | YP_577971 |
Protein GI | 92118242 |
COG category | [C] Energy production and conversion |
COG ID | [COG0114] Fumarase |
TIGRFAM ID | [TIGR00979] fumarate hydratase, class II |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGTTTCCT CATCGCGCAA AACCAAAACG GGGACGCGAA CGGAAACCGA CAGTTTCGGC CCCATCGACG TTCAAGCCGA CCGCTACTGG GGAGCCCAGA CTGAGCGCAG CCGGCGGAAC TTCCGCATCG GACACGACCG GATGCCGATG CAAATCGTCC GGGCGCTCGG CATCGTCAAG CTCGCAGCGG CAGAGACCAA CCGCGAGCTG GGCCTGCTCG ACCGGCGGCG CGCGACCGCA ATCATTCGCG CCGCGCGCGA AGTGATCGAC GGCAAGCTCG ACGATCATTT TCCGCTGGTC GTCTGGCAAA CCGGCTCCGG CACGCAGACC AACATGAACC TCAACGAGGT GATCGCCAAC CGCGCCAGCG AGTTGCTCGG CGGCGAACTC GGCGCCAAGA AGCCCGTTCA TCCCAACGAT CACGTCAACA TGAGCCAGTC GTCGAACGAC TCATTTCCGA CAGCCATGCA CATCGCGGCG GCCCAGGGCA TCGCGTCCGA CCTGGTTCCC GCTCTGACCG CACTGCTCAA GGCGCTGCGC AAAAAGGAAA AGGCGTTCGC TCATATCGTC AAGATCGGCC GGACTCATAC CCAGGACGCG ACGCCGCTGA CGCTCGGCCA GGAGTTCTCC GGCTATGCAG CGCAAGTCGA GAGCGGCCTC GCACGGCTTC GCACCGCGAT AAAGGACCTC TATCCACTGG CGCAAGGCGG AACCGCGGTG GGTACCGGCC TGAACTCGAA GCCGAAATTT GCGAAACTGT TTGCGAAACA CGCGGCGGCG CTTGCGAAAC TCCCGTTCAC GAGCGCTCCC AACAAATTCG AGGCGCTGGC CTCCAACGAC GCTTATGTTT TCGTTCACGG GGCGATCAAC GCGGTCGCAA CCGGCCTGTT CAAGATCGCG AACGATATTC GTTTTTTGGG TTCCGGGCCG CGCTCCGGCC TCGGAGAACT GATCCTTCCC GAAAACGAAC CGGGGTCGTC GATCATGCCG GGGAAGGTCA ATCCGACCCA GTGCGAAGCC ATGACCATGG TTTGCTGTCA GGTGTTCGGC AATCACACCA CCGTGACGGT CGCCGGCAGT CAGGGACATT TCGAACTCAA CGTTTACAGG CCTGTTCTGG CATATTGCAT GATCAACTCC ATCCAATTGC TCGCCGACGT CGTGCGTTCC TTCACCGAGC ACTGCATCGA GGGCATTCGC GCCGACGAGA AGCGAATTCA CGACCTGATG CAACGCTCGC TGATGTTGGT GACGGCGCTC GCACCCAAGA TCGGTTATGA CAACGCGGCG ACGGTCGCCA AAGCCGCCCA CGCCCGCGGA ACGACGTTGA AGGAGGAGGC TCAGCGGCTT GGCTTTGTCA CGGCCGCGGA ATTCGACCGG CTGGTGCAGC CCGACAAAAT GACGCGACCA GGATGA
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Protein sequence | MVSSSRKTKT GTRTETDSFG PIDVQADRYW GAQTERSRRN FRIGHDRMPM QIVRALGIVK LAAAETNREL GLLDRRRATA IIRAAREVID GKLDDHFPLV VWQTGSGTQT NMNLNEVIAN RASELLGGEL GAKKPVHPND HVNMSQSSND SFPTAMHIAA AQGIASDLVP ALTALLKALR KKEKAFAHIV KIGRTHTQDA TPLTLGQEFS GYAAQVESGL ARLRTAIKDL YPLAQGGTAV GTGLNSKPKF AKLFAKHAAA LAKLPFTSAP NKFEALASND AYVFVHGAIN AVATGLFKIA NDIRFLGSGP RSGLGELILP ENEPGSSIMP GKVNPTQCEA MTMVCCQVFG NHTTVTVAGS QGHFELNVYR PVLAYCMINS IQLLADVVRS FTEHCIEGIR ADEKRIHDLM QRSLMLVTAL APKIGYDNAA TVAKAAHARG TTLKEEAQRL GFVTAAEFDR LVQPDKMTRP G
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