Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2725 |
Symbol | |
ID | 4030158 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 3003600 |
End bp | 3005093 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637971178 |
Product | peptidase S1C, Do |
Protein accession | YP_577964 |
Protein GI | 92118235 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCGGAG CGATCCCCGC GTTGAGCTTT CGCCGGCGTT CCCTGTTGGC CGCGCTTTGC CTCGGCGCCG CGAGTGCCCT GATATCCGCG CCGGCGCTGG CCCGCGGTCC CGACGGCATT GCCGACGTCG CGGAAAAGGT GATCGACGCG GTGGTCAATA TCTCGACGAC CCAGACGGTC GAAGCCAAAG GCGGCAGCGA GGGGCACCGC GTCATTCCGC AGCTTCCGCC GGGTTCGCCA TTCGAGGAGT TTTTCGACGA CTTCTTCAAA AACCGCCGCG GCGGCAAGGA TGGCGGTCTG CAACCGCACA AGACCAACTC GCTCGGCTCC GGATTCATCG TCGATCCCGC CGGGATTGTC GTCACCAACA ATCACGTCAT CGCCGATTCC GACGAGATCA ACGTCATTCT GAACGACGGC ATCAAGGTCA AGGCCGAGAT CGTCGGCGTC GACAAGAAAA CCGATCTTGC GGTGTTGAAG TTCAAGCCGC CGCACCCGCT GACGGCCGTC AAGTTCGGCG ATTCCGACAA GTTGCGGCTC GGCGAGTGGG TGGTTGCCAT CGGCAATCCG TTCAGCCTCG GCGGCACCGT TACCGCCGGC ATCGTCTCGG CGCGCAACCG CGACATCAAC AACGGCCCCT ATGACAGCTA CATCCAGACC GACGCCGCCA TCAACCGCGG TAATTCCGGT GGCCCGCTAT TCAACCTCGA TGGCGAGGTC GTGGGGGTCA ACACGCTGAT CATCTCACCG TCGGGCGGAT CGATCGGCAT CGGCTTCGCG GTGCCGTCGA AAACGGTCGC GGGCGTCGTC GATCAATTGC GGCAGTTTGG TGAACTGCGT CGCGGTTGGC TCGGCGTCCG CATTCAGCAG GTCACCGACG AAATCGCCGA CAGTCTCAAT ATCAAACCGG CGCGCGGCGC GCTGGTCGCC GGCGTCGAGG ACAAGGGCCC GGCCAAGCCC GCCGGCATCG AACCCGGCGA CGTCATCATC GCTTTCGACG GAAAGGATAT CAAGGAGCCG AAAGATCTGT CGCGCATCGT GGCCGACACG GCCGTCGGCA AGACCGTCAA CGTCATGATC ATCCGCAAGG GCAAGCAAGA GACCAAGAAG GTGACGCTGG GGCGGCTCGA CGACAGCGAC AAGGCCACGC CGGTCTCGGT CAAGACCAAG CCCGACAGCG ACGACAAGCC CGTAACGCAG AAGGCGCTCG GCCTCGATCT GGCCGCGCTG AGCAAGGACC TGCGGACGCG CTACAAGATC AAGGACAGCG TCAAGGGTGT CATCATCACC GACGTGGACG CGGATTCCGA CGCGGCCGAG AAGCGGCTCA GCGCCGGCGA CGTCATCGTC GAGGTGGCGC AGGAAGCCGT GAGCAGCGCC TCCGATATCC GCAAGCGTAT CGATCAGTTG AAGAAGGACG GCAAAAAGGC GGTGTTGCTG ATGGTTTCGA ACGGCACCGG CGAACTGCGG TTTGTGGCGC TGAGCTTGAA GTAG
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Protein sequence | MTGAIPALSF RRRSLLAALC LGAASALISA PALARGPDGI ADVAEKVIDA VVNISTTQTV EAKGGSEGHR VIPQLPPGSP FEEFFDDFFK NRRGGKDGGL QPHKTNSLGS GFIVDPAGIV VTNNHVIADS DEINVILNDG IKVKAEIVGV DKKTDLAVLK FKPPHPLTAV KFGDSDKLRL GEWVVAIGNP FSLGGTVTAG IVSARNRDIN NGPYDSYIQT DAAINRGNSG GPLFNLDGEV VGVNTLIISP SGGSIGIGFA VPSKTVAGVV DQLRQFGELR RGWLGVRIQQ VTDEIADSLN IKPARGALVA GVEDKGPAKP AGIEPGDVII AFDGKDIKEP KDLSRIVADT AVGKTVNVMI IRKGKQETKK VTLGRLDDSD KATPVSVKTK PDSDDKPVTQ KALGLDLAAL SKDLRTRYKI KDSVKGVIIT DVDADSDAAE KRLSAGDVIV EVAQEAVSSA SDIRKRIDQL KKDGKKAVLL MVSNGTGELR FVALSLK
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