| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2725 |
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| Symbol | |
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| ID | 4030158 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 3003600 |
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| End bp | 3005093 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637971178 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_577964 |
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| Protein GI | 92118235 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGGAG CGATCCCCGC GTTGAGCTTT CGCCGGCGTT CCCTGTTGGC CGCGCTTTGC
CTCGGCGCCG CGAGTGCCCT GATATCCGCG CCGGCGCTGG CCCGCGGTCC CGACGGCATT
GCCGACGTCG CGGAAAAGGT GATCGACGCG GTGGTCAATA TCTCGACGAC CCAGACGGTC
GAAGCCAAAG GCGGCAGCGA GGGGCACCGC GTCATTCCGC AGCTTCCGCC GGGTTCGCCA
TTCGAGGAGT TTTTCGACGA CTTCTTCAAA AACCGCCGCG GCGGCAAGGA TGGCGGTCTG
CAACCGCACA AGACCAACTC GCTCGGCTCC GGATTCATCG TCGATCCCGC CGGGATTGTC
GTCACCAACA ATCACGTCAT CGCCGATTCC GACGAGATCA ACGTCATTCT GAACGACGGC
ATCAAGGTCA AGGCCGAGAT CGTCGGCGTC GACAAGAAAA CCGATCTTGC GGTGTTGAAG
TTCAAGCCGC CGCACCCGCT GACGGCCGTC AAGTTCGGCG ATTCCGACAA GTTGCGGCTC
GGCGAGTGGG TGGTTGCCAT CGGCAATCCG TTCAGCCTCG GCGGCACCGT TACCGCCGGC
ATCGTCTCGG CGCGCAACCG CGACATCAAC AACGGCCCCT ATGACAGCTA CATCCAGACC
GACGCCGCCA TCAACCGCGG TAATTCCGGT GGCCCGCTAT TCAACCTCGA TGGCGAGGTC
GTGGGGGTCA ACACGCTGAT CATCTCACCG TCGGGCGGAT CGATCGGCAT CGGCTTCGCG
GTGCCGTCGA AAACGGTCGC GGGCGTCGTC GATCAATTGC GGCAGTTTGG TGAACTGCGT
CGCGGTTGGC TCGGCGTCCG CATTCAGCAG GTCACCGACG AAATCGCCGA CAGTCTCAAT
ATCAAACCGG CGCGCGGCGC GCTGGTCGCC GGCGTCGAGG ACAAGGGCCC GGCCAAGCCC
GCCGGCATCG AACCCGGCGA CGTCATCATC GCTTTCGACG GAAAGGATAT CAAGGAGCCG
AAAGATCTGT CGCGCATCGT GGCCGACACG GCCGTCGGCA AGACCGTCAA CGTCATGATC
ATCCGCAAGG GCAAGCAAGA GACCAAGAAG GTGACGCTGG GGCGGCTCGA CGACAGCGAC
AAGGCCACGC CGGTCTCGGT CAAGACCAAG CCCGACAGCG ACGACAAGCC CGTAACGCAG
AAGGCGCTCG GCCTCGATCT GGCCGCGCTG AGCAAGGACC TGCGGACGCG CTACAAGATC
AAGGACAGCG TCAAGGGTGT CATCATCACC GACGTGGACG CGGATTCCGA CGCGGCCGAG
AAGCGGCTCA GCGCCGGCGA CGTCATCGTC GAGGTGGCGC AGGAAGCCGT GAGCAGCGCC
TCCGATATCC GCAAGCGTAT CGATCAGTTG AAGAAGGACG GCAAAAAGGC GGTGTTGCTG
ATGGTTTCGA ACGGCACCGG CGAACTGCGG TTTGTGGCGC TGAGCTTGAA GTAG
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| Protein sequence | MTGAIPALSF RRRSLLAALC LGAASALISA PALARGPDGI ADVAEKVIDA VVNISTTQTV
EAKGGSEGHR VIPQLPPGSP FEEFFDDFFK NRRGGKDGGL QPHKTNSLGS GFIVDPAGIV
VTNNHVIADS DEINVILNDG IKVKAEIVGV DKKTDLAVLK FKPPHPLTAV KFGDSDKLRL
GEWVVAIGNP FSLGGTVTAG IVSARNRDIN NGPYDSYIQT DAAINRGNSG GPLFNLDGEV
VGVNTLIISP SGGSIGIGFA VPSKTVAGVV DQLRQFGELR RGWLGVRIQQ VTDEIADSLN
IKPARGALVA GVEDKGPAKP AGIEPGDVII AFDGKDIKEP KDLSRIVADT AVGKTVNVMI
IRKGKQETKK VTLGRLDDSD KATPVSVKTK PDSDDKPVTQ KALGLDLAAL SKDLRTRYKI
KDSVKGVIIT DVDADSDAAE KRLSAGDVIV EVAQEAVSSA SDIRKRIDQL KKDGKKAVLL
MVSNGTGELR FVALSLK
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