| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2723 |
|---|
| Symbol | |
|---|
| ID | 4030156 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 3001611 |
|---|
| End bp | 3002564 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637971176 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_577962 |
|---|
| Protein GI | 92118233 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGGA CGAATCCTGG CGAGGCAGAC GGCGGGGCGG CGGATGCCGT GCTTATCGCA
GGGCCGACCG CGAGCGGCAA GTCCGCGCTG GCGCTTTCGC TTGCCGAGCG GACCGGCGGC
ATCGTCATCA ACACCGATTC GATGCAGGTC TATCGCGACC TCCGCATCAT CACTGCGCGC
CCGACGCCCG ACGAGGAAGC GCGCGTACCG CACCGGCTCT ACGGTCATGT CGATGCGGAC
GTGAACTGTT CCGCCGGAAT GTGGGTGGCC GATGCCGCGG CAGCGCTCGA AGAAGCGCTC
GCACAAAACC GGCTGCCGAT TTTCGCCGGC GGCTCCGGCC TCTACTTCAA GGCGCTGACG
CGCGGCCTGT CGGCGGTGCC GCCGATTCCG TCCCAAGTGC GCGACGACGT GCGCGCGCGG
CTCGAACGGG ACGGGGCCGA GGCGCTTCAC GCTGTTCTGG CGCGGCGCGA TCCGGCGGCG
GCGCAACGTC TGAAGCCGCG CGACCGCGCC CGCATCGCCC GCGCGCTCGA AGTCGTCGAG
GCGACCGGTC GCTCGCTGAC CGACTGGCAT CGCGATGGCC TGCCGCCGCT GCTGCCGCCG
GACAAAGTGA GGGCGATCTT CCTCGCGCCG GATCGTGAAG CGCTCTATGC GCGAATAGAT
GCCCGCTTCG GAGCGATGCT CGCGGCCGGC GCGCTGGAGG AGGTGAGGGC GCTGGCCGAA
CGCCACCTCG ATCCGCTGCT GCCGGCGATG AAGGCGCATG GCGTGCCGGC GCTGATGCGG
CATCTGCGCG GGGAGATTTC TTTGGAGGAG GCCGCCGAGA TCGGCCGCGC CGACACCCGC
CATTACGCCA AGCGGCAGTT CACATGGTTT CGTCATCAAT TGCCGGAGTT TCGGTGGACG
AGTCCGGAGG AGGCGGAAGC GCAACTTAGC TGTGTTATTC CGGGCCCACG CTAA
|
|---|
| Protein sequence | MSGTNPGEAD GGAADAVLIA GPTASGKSAL ALSLAERTGG IVINTDSMQV YRDLRIITAR
PTPDEEARVP HRLYGHVDAD VNCSAGMWVA DAAAALEEAL AQNRLPIFAG GSGLYFKALT
RGLSAVPPIP SQVRDDVRAR LERDGAEALH AVLARRDPAA AQRLKPRDRA RIARALEVVE
ATGRSLTDWH RDGLPPLLPP DKVRAIFLAP DREALYARID ARFGAMLAAG ALEEVRALAE
RHLDPLLPAM KAHGVPALMR HLRGEISLEE AAEIGRADTR HYAKRQFTWF RHQLPEFRWT
SPEEAEAQLS CVIPGPR
|
|---|
| |