Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2708 |
Symbol | |
ID | 4030292 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2983327 |
End bp | 2985114 |
Gene Length | 1788 bp |
Protein Length | 595 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637971160 |
Product | hypothetical protein |
Protein accession | YP_577947 |
Protein GI | 92118218 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGACCCC TTATTCTGGT CTTCGTCCTC CTGAATTTTT CCTTTGTCAC ATCATCTTTG GCGGATGAGT CTGGTCCGGT CTTCGTTGAC CAGGGCTCAG CCTGGGATGC GTCCAGCCGC ACCGATTTCT ACACACGCGA TCAAGGCTCG CGCCTCATCC CTTTTGCGTG GCTCAAAGCG TTAAAGCAAG CTGATGGCGC TCCCTTTCTC TCCGATAGTT TGGCGAGATA CGGATATTTG CCCGGCCCTG AAGATTCGAT CGGGCTTCCG GTGGGATTTC ACGCAACTGG CCCGACCGGC GCGAAGGTCG TTGGAATGAC GTGCTCCGCC TGTCACACCC GTCAGATCAA GGTCGGAGAA CGGCAGTATC GTATAGATGG GGGACCGGCA CTCGTCGATT TCCAGGCGTT TCTGGGTGAC CTCGATAAGG CGATGGCGCG CGCAACGTCC GACGATGCCG CGTTCCAGAC ATTTGCTGCT TCCGTCCTCC AGACGGCCAA GCCTGACAGC GATAAAGTCG CCGCGCTACG GAGCGACGTT GACGCATGGT ACGTTCGCTA TCACACCATT GTCGATCGAT CGCTTCCCAA TCCCGGATGG GGACTGGGCC GCCTCGATGC AGTTGGCATG ATCTTCAATC GCGTGACCGG GTTGGGTATC GGTCCAGAGC CGTCGTTTCT GATTCCGGAG AACATTCACA GAGCCGATGC ACCGGTACGT TATCCTTTTC TCTGGAATGC GCCCAAACAG GACAAGACAC AGTGGCCAGG CTTCGCGGAC AACGGGAGTG ATATCCTCGG GCTGGCCCGG AATGTCGGCG AAGTGATGGG CGTGTTCGGT GACTATCAGC CCACGCGCAA GGGTCTGATT ATCGACTTCT TGAACAATAA CTCAGCGAAT TTCGACGGGC TGCAAAAGCT CGAGGATCTT GCGAAGAAGA TTGGACCGCC GAAATGGCCA TGGTCCGTCG ATATCGCATT GGCGGCCAAG GGCAAGGCGA TCTTTGAACG ATCGACCGCT GACGGCGGGT GCCAAGAATG CCACGGTGAG AAAGCCGGCA AGGTGCGTTT TCCATTTCAG CAGACCTGGG CGACGCCAAT TCAAAATGTC GGGACGGACA CACGTGAATA CGATATCCTG GGATGGACGG CCAAATCAGG AGTCCTGAAA GGTGCTTACA TTCCGTTCGC GACGAAGCCT TTGAAGGAAA CAGACCTCGC GTTCAATATC TTATCGACCT CGGTGATAGG TACGATCGGA GAGCATGTCG TGAGCTTCGC GACCAGCTCG TCACACCGGA CGTTTGGCAA AGCCATCGAA CCCGGTGCTG CGCCGAGTGC ATCAGAGTCC GTAGACGCCA CTCGACTCCC ATCCGTTTTG CAGGACTTGC CGGGCGCATT CAGGTTTCCT GACGCCGCTG CAACTCTCGA AACCCGGCAT CGACTTAACA TGGAAGCTGA AAGCCCGACG CCTCCGAAGG GCGCCTATGA ATCGCGGGTC CTTCAGGGCA TTTGGGCGGC CGCGCCGTAC CTGCACAATG GTTCGGTCGC AAGTCTTGCC GAATTGCTTA AGCCCGCAAG CCAGCGACAG CAGCGGTTCG CGATCGGTCC CGACTATGAC ACAAATAATA TCGGTATTGC TTCAAATCAG GCCCAGACCG GCAATGTTCG CGAGACGACC GGTTGTGACG ATCTGAACTC TGGTAATAGT CGCTGCGGCC ACGAATTTGG GACGAGTCTA CCGGATACTG ACAAGAAAGC TCTTCTCGAA TATCTGAAAA CGCTTTGA
|
Protein sequence | MRPLILVFVL LNFSFVTSSL ADESGPVFVD QGSAWDASSR TDFYTRDQGS RLIPFAWLKA LKQADGAPFL SDSLARYGYL PGPEDSIGLP VGFHATGPTG AKVVGMTCSA CHTRQIKVGE RQYRIDGGPA LVDFQAFLGD LDKAMARATS DDAAFQTFAA SVLQTAKPDS DKVAALRSDV DAWYVRYHTI VDRSLPNPGW GLGRLDAVGM IFNRVTGLGI GPEPSFLIPE NIHRADAPVR YPFLWNAPKQ DKTQWPGFAD NGSDILGLAR NVGEVMGVFG DYQPTRKGLI IDFLNNNSAN FDGLQKLEDL AKKIGPPKWP WSVDIALAAK GKAIFERSTA DGGCQECHGE KAGKVRFPFQ QTWATPIQNV GTDTREYDIL GWTAKSGVLK GAYIPFATKP LKETDLAFNI LSTSVIGTIG EHVVSFATSS SHRTFGKAIE PGAAPSASES VDATRLPSVL QDLPGAFRFP DAAATLETRH RLNMEAESPT PPKGAYESRV LQGIWAAAPY LHNGSVASLA ELLKPASQRQ QRFAIGPDYD TNNIGIASNQ AQTGNVRETT GCDDLNSGNS RCGHEFGTSL PDTDKKALLE YLKTL
|
| |