| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2705 |
|---|
| Symbol | |
|---|
| ID | 4030289 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2981030 |
|---|
| End bp | 2981920 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637971157 |
|---|
| Product | citrate lyase |
|---|
| Protein accession | YP_577944 |
|---|
| Protein GI | 92118215 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTGC GTTCGCTTCT GTTCGTCCCG GCCGACAGCG ATCGCAAGTT CGCCAGGGCC
GACACCTGCG GCGCCGACGC GCTGATCCTC GATCTGGAAG ATTCGGTCGC GCCCGGCCGC
AAGGCGTTTG CGCGTGAAGC GGTGAAGAAC CTGCTCGGCG CGGCGACGCG CAACTGGCGG
TTTCTGGTGC GGATCAATCC GCTCGGAACG GGGCTGACGC TGGAGGATCT CGTCGCCGTC
GTTCGTCCGG GGCTGGACGG CATCCTGATT CCGAAGGTCA ACGGCATTCA GGACGTCGAG
CTGATTTCGC ACTATGTCGA TGTCCTGGAG GTTGCCGTCG GCATTCCCGC CGGGCATGTG
AAGCTGCTGG TGTTGGCCAC CGAGACGCCG GCCGCGATGT TCGGCTTTGC CGGCTATGTC
ACGCCGAGTT CAAGTCCAAG CTCAAGGCTG GTGGCCATGA CATGGGGCGC GGAAGACCTT
AGCGCCGCGC TCGGCGCGCT CACCAATAAA GAACCGAACG GCGATTGGAC GTTCCCTTAT
CAGGTCGCGC GTGCCCAATG TGTTTTCGCT GCCAACGCGG CGGGCGTTCT CGCGCTCGAA
ACCCTGTACG GCGATTACAA GGATCAGGCC GGCCTCGCAG AGAGTTGCCG GATTGCGCGC
CGAGACGGGT TCGTCGGGCG TCTCGCGATA CATCCGGATC AGGTTGCTAT TATCAACGCC
TGCTTCACCC CGTCCGACGC CGATCTGGCT CACGCCCGTC GCGTCGTTGC GGCCTTCGCC
AGCCAACCCG ACGTCGGCAC GGTGGGCATC GACGGCAAGA TGTATGATAG GCCGCACCTG
GTCGCGGCGA AGCGAGCGTT GGCCTCGGTT GGCGAGACCA TCGACGAATG A
|
|---|
| Protein sequence | MKLRSLLFVP ADSDRKFARA DTCGADALIL DLEDSVAPGR KAFAREAVKN LLGAATRNWR
FLVRINPLGT GLTLEDLVAV VRPGLDGILI PKVNGIQDVE LISHYVDVLE VAVGIPAGHV
KLLVLATETP AAMFGFAGYV TPSSSPSSRL VAMTWGAEDL SAALGALTNK EPNGDWTFPY
QVARAQCVFA ANAAGVLALE TLYGDYKDQA GLAESCRIAR RDGFVGRLAI HPDQVAIINA
CFTPSDADLA HARRVVAAFA SQPDVGTVGI DGKMYDRPHL VAAKRALASV GETIDE
|
|---|
| |