Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2704 |
Symbol | |
ID | 4030288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 2979681 |
End bp | 2980955 |
Gene Length | 1275 bp |
Protein Length | 424 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637971156 |
Product | beta-lactamase |
Protein accession | YP_577943 |
Protein GI | 92118214 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.431746 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACCT CCGCTCCCAC CTCTCCCGAA ACCGCCGGCA TGTCCAAGGC CGCGCTCGAT CGGATCGACG ACCATCTGAA GCGGCGATAC ATCGACGCGG GCCGGTTTCC GGGCACGCAG CTTGTGGTCT ATCGGCGCGG TAACATCGTG CACAGCGCGG TGCAGGGTCT GGCCGACCTC GAACGCCAGG TGCCGATGAA AGACGACACC ATCTTCCGCA TCTATTCCAT GACCAAACCG ATTACGTCGG TCGCGTTCAT GATGCTGGTG GAGCAAGGCC TCGTTGCGCT CGACGAGCCG GTTCACAAGT ACATTCCCGA GTGGAAAAAC CTTGGCGTGT TCCAGGCCGG CACCGCTCCC GCCTTCATGA CCAGACCGCC GGCGCGACCT ATGCAGATCG TCGACCTGCT GCGGCATACA TCCGGGCTGA CTTACGGTTT CCAGCAGCGC AGCAACGTCG ACGCCGCCTA TCGCGACAGG CAGATCGGCA CGATTGAGAT GGCCGGCACG CTCGATTCGA TGATCGCGGA CCTCGCCGAT ATCCCGCTGG AGTTCTCGCC CGGCGAAGCC TGGAACTACT CGGTGTCCAC CGATGTGATC GGCTATCTCG TCGGCAAGAT CAGCGGCATC CCGTTCGAGC AATTCCTGAA AGAGCGCATT TTCAATCCGC TGGGAATGGC CGACACCGAC TTCTTCGTCC CGGCCGACAA AACGCATCGC CTGGCGGCCT GCTACAATGC GACGGCAGCC GGCATGACGT CGTTTCATTC GCCGAACGCG AAGGGCAGCC TGGCGTTGCA GGACGATCCG GCGACCAGTT CCTTCCTCTC TCCGCCCGAA TTCATTTCCG GCGGCGGCGG TCTGTGCTCG ACGGCGGCCG ACTACCTCAC CTTCTGCCGG GCGCTGCTCA ACGGCGGCGA ACTCGGCGGC GTCAGGCTGA TCGGGCCGAA AACGCTGGCG CTGATGACAA CCAATCACCT GCCGGGCAAC CGGGACCTGC CGGAGATGTC GCGATCGATG TTTGCGGAAG CGAGCTACAG CGGCATCGGC TTCGGCCTCG GCTTTTCCGT GACCATGGAC CCCGCAAAGA CACTCATCCC CGGGAGCCCC GGCGAGTATG CCTGGGGCGG TGCTGCGACG ACATCGTTCT GGATCGATCC GGCGGAAGAG CTGATCGCCA TATTCATGAC GCAGGTGCTG CCGTCGAGCG CCTATCCGAT CCGGCGCGAG CTTCGCACCA TGGTGTATGC GGCCATCACC GACAGCAATC TTTGA
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Protein sequence | MPTSAPTSPE TAGMSKAALD RIDDHLKRRY IDAGRFPGTQ LVVYRRGNIV HSAVQGLADL ERQVPMKDDT IFRIYSMTKP ITSVAFMMLV EQGLVALDEP VHKYIPEWKN LGVFQAGTAP AFMTRPPARP MQIVDLLRHT SGLTYGFQQR SNVDAAYRDR QIGTIEMAGT LDSMIADLAD IPLEFSPGEA WNYSVSTDVI GYLVGKISGI PFEQFLKERI FNPLGMADTD FFVPADKTHR LAACYNATAA GMTSFHSPNA KGSLALQDDP ATSSFLSPPE FISGGGGLCS TAADYLTFCR ALLNGGELGG VRLIGPKTLA LMTTNHLPGN RDLPEMSRSM FAEASYSGIG FGLGFSVTMD PAKTLIPGSP GEYAWGGAAT TSFWIDPAEE LIAIFMTQVL PSSAYPIRRE LRTMVYAAIT DSNL
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