Gene Nham_2704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2704 
Symbol 
ID4030288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2979681 
End bp2980955 
Gene Length1275 bp 
Protein Length424 aa 
Translation table11 
GC content63% 
IMG OID637971156 
Productbeta-lactamase 
Protein accessionYP_577943 
Protein GI92118214 
COG category[V] Defense mechanisms 
COG ID[COG1680] Beta-lactamase class C and other penicillin binding proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.431746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAACCT CCGCTCCCAC CTCTCCCGAA ACCGCCGGCA TGTCCAAGGC CGCGCTCGAT 
CGGATCGACG ACCATCTGAA GCGGCGATAC ATCGACGCGG GCCGGTTTCC GGGCACGCAG
CTTGTGGTCT ATCGGCGCGG TAACATCGTG CACAGCGCGG TGCAGGGTCT GGCCGACCTC
GAACGCCAGG TGCCGATGAA AGACGACACC ATCTTCCGCA TCTATTCCAT GACCAAACCG
ATTACGTCGG TCGCGTTCAT GATGCTGGTG GAGCAAGGCC TCGTTGCGCT CGACGAGCCG
GTTCACAAGT ACATTCCCGA GTGGAAAAAC CTTGGCGTGT TCCAGGCCGG CACCGCTCCC
GCCTTCATGA CCAGACCGCC GGCGCGACCT ATGCAGATCG TCGACCTGCT GCGGCATACA
TCCGGGCTGA CTTACGGTTT CCAGCAGCGC AGCAACGTCG ACGCCGCCTA TCGCGACAGG
CAGATCGGCA CGATTGAGAT GGCCGGCACG CTCGATTCGA TGATCGCGGA CCTCGCCGAT
ATCCCGCTGG AGTTCTCGCC CGGCGAAGCC TGGAACTACT CGGTGTCCAC CGATGTGATC
GGCTATCTCG TCGGCAAGAT CAGCGGCATC CCGTTCGAGC AATTCCTGAA AGAGCGCATT
TTCAATCCGC TGGGAATGGC CGACACCGAC TTCTTCGTCC CGGCCGACAA AACGCATCGC
CTGGCGGCCT GCTACAATGC GACGGCAGCC GGCATGACGT CGTTTCATTC GCCGAACGCG
AAGGGCAGCC TGGCGTTGCA GGACGATCCG GCGACCAGTT CCTTCCTCTC TCCGCCCGAA
TTCATTTCCG GCGGCGGCGG TCTGTGCTCG ACGGCGGCCG ACTACCTCAC CTTCTGCCGG
GCGCTGCTCA ACGGCGGCGA ACTCGGCGGC GTCAGGCTGA TCGGGCCGAA AACGCTGGCG
CTGATGACAA CCAATCACCT GCCGGGCAAC CGGGACCTGC CGGAGATGTC GCGATCGATG
TTTGCGGAAG CGAGCTACAG CGGCATCGGC TTCGGCCTCG GCTTTTCCGT GACCATGGAC
CCCGCAAAGA CACTCATCCC CGGGAGCCCC GGCGAGTATG CCTGGGGCGG TGCTGCGACG
ACATCGTTCT GGATCGATCC GGCGGAAGAG CTGATCGCCA TATTCATGAC GCAGGTGCTG
CCGTCGAGCG CCTATCCGAT CCGGCGCGAG CTTCGCACCA TGGTGTATGC GGCCATCACC
GACAGCAATC TTTGA
 
Protein sequence
MPTSAPTSPE TAGMSKAALD RIDDHLKRRY IDAGRFPGTQ LVVYRRGNIV HSAVQGLADL 
ERQVPMKDDT IFRIYSMTKP ITSVAFMMLV EQGLVALDEP VHKYIPEWKN LGVFQAGTAP
AFMTRPPARP MQIVDLLRHT SGLTYGFQQR SNVDAAYRDR QIGTIEMAGT LDSMIADLAD
IPLEFSPGEA WNYSVSTDVI GYLVGKISGI PFEQFLKERI FNPLGMADTD FFVPADKTHR
LAACYNATAA GMTSFHSPNA KGSLALQDDP ATSSFLSPPE FISGGGGLCS TAADYLTFCR
ALLNGGELGG VRLIGPKTLA LMTTNHLPGN RDLPEMSRSM FAEASYSGIG FGLGFSVTMD
PAKTLIPGSP GEYAWGGAAT TSFWIDPAEE LIAIFMTQVL PSSAYPIRRE LRTMVYAAIT
DSNL