| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2700 |
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| Symbol | |
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| ID | 4030284 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2974615 |
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| End bp | 2975826 |
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| Gene Length | 1212 bp |
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| Protein Length | 403 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637971152 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_577939 |
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| Protein GI | 92118210 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGGTAA CAAGGCAAGG CAGTACCGGC GACAAGACCG ACGTTTCGGC GCGTGACCTG
AGCGGGAAGT CTCACGCGCG TCCGGTGCGC ATGAGGCGCT GGTTCATCGT CATCGGCTTG
CTGCTGGCGG TGCTCGTCGC CGGGCTGGTC GGGTTTAATG CGTTCCGCGC CCACATGATC
GCGCAGTTCT TCGCCAACAA CAAGCCGCCG CCGGTGACGA TCAGCGCGGT CGAGGCGAAG
TCCGAGGTGC TGCCGAACCT GCAGCGGGCT GTCGGCAGCC TCGCCGCGGT GCATCAGGTC
AACGTCACGT CCGACGTCAA CGGCCGCATC ACCGACATCC TGTTCACCGC CGGCAGCCAC
GTCATCAAGG GCACGCCGCT GGTGCAACTG TTCGACAAGC CGGACCAGGG CGATCTCGCC
AGCTTCAAGG CGCAGGCGAC CGTCGCGCGA CTCGCGCTGG AGAGGGCGCA GCAGCTCAAG
GCGCGTCAGG TCGGCCCGCA AGTCACCGTG GATCAGGCGC AGGCCGCGTT CGACCAGGCC
AATGCCGGCA TCGCCAAGAC CGAGGCGATC ATTTCGCAGA AGCTGGTGCG CGCGCCGTTC
GACGGCGTGC TCGGCGTGCG TCAGGTGGAA GTGGGACAAT TTCTCACCGC CGGTACGCAG
ATCGTGTCGC TGACCGATCT CTCGACGCTG TACGCCAATT TCACCGTCAC TGAAAAGGAC
AGCGGCCGGC TCAAAGTCGG CCAGACTGTA CGAGTGTCGG TCGATGCTTA TCCGGGCAAG
GAGTTCGACG GCAAGATCAC CACCATCGAG CCGCAGATTT CGACCGACAC CCGCAACATT
CGCGTCCAGG CGACCATCAC CAACCCCGGC GATATCCTGA AACCCGGCAT GTTCGCGAAT
GTGATCGTGG TGCTGCCTGA CAAGCCGGCG GTCATCACGG TGCCGGAAAC CGCAGTCGAG
TACACGCTGT ATGGCGACTC CGTCTATCTC ATCAAGGAGA AGAAGGAGGA TGACGGCAAG
ACCAGCTTGA CCGCCGAGCG AACCTTCGTG CGCACCGGCG ACCGGATCCA CGGGCGTGCG
GTAATCGAGA AAGGGCTGAA GCCCGGCGAC AAGGTCGCTG CGGTCGGCCA GCTCAAGCTG
CAGTCGGGCG CCGCGGTCGA GATCTCGCAG GATCCGCTGC CGCCGATCCC GGAGAAGCCG
CCGCTGAACT GA
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| Protein sequence | MTVTRQGSTG DKTDVSARDL SGKSHARPVR MRRWFIVIGL LLAVLVAGLV GFNAFRAHMI
AQFFANNKPP PVTISAVEAK SEVLPNLQRA VGSLAAVHQV NVTSDVNGRI TDILFTAGSH
VIKGTPLVQL FDKPDQGDLA SFKAQATVAR LALERAQQLK ARQVGPQVTV DQAQAAFDQA
NAGIAKTEAI ISQKLVRAPF DGVLGVRQVE VGQFLTAGTQ IVSLTDLSTL YANFTVTEKD
SGRLKVGQTV RVSVDAYPGK EFDGKITTIE PQISTDTRNI RVQATITNPG DILKPGMFAN
VIVVLPDKPA VITVPETAVE YTLYGDSVYL IKEKKEDDGK TSLTAERTFV RTGDRIHGRA
VIEKGLKPGD KVAAVGQLKL QSGAAVEISQ DPLPPIPEKP PLN
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