| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2688 |
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| Symbol | |
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| ID | 4032386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | - |
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| Start bp | 2955824 |
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| End bp | 2958187 |
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| Gene Length | 2364 bp |
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| Protein Length | 787 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637971140 |
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| Product | RND superfamily transporter |
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| Protein accession | YP_577927 |
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| Protein GI | 92118198 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1033] Predicted exporters of the RND superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTGAGC GAAACCGCGA TGCCGACCAG GGCGCCCCGA TCGACCGGTC GCTCAGCATC
GCCTTCGGGC TTGAGCGGAT CGGTCTGATT GCGGTGCGTG CGCCGATCCT GTCCTGCATC
ATTCTGCTCG CCATGGTCAT CGGCGCGGTG TTCGGAATCC AGCGCATCAA GATCGACGAT
TCGCTCAGCC AGTTGTTCCG CTCCGACACC AAGGAGTATC ATCAGTACGA GGAAGTGACC
AAGCGCTTCC CGTCGAGCGA GTTCGACGTG CTGGTCGTGG TCGAGGGCAA GGCGCTGCTC
GAACGCGACA ACCTCGAAAA GCTGCGGGAT ATGGTCACCG ACCTGCAACT GGTCGATGGC
GTGCGCGGCC TGATCTCGTT GTTCTCGGCG CGTCAGGCGC CCGAACCCGG CAAGCTGCCG
GCGGCGCTGT TTCCGTCCGA ACTGCCGCAA GGCGCCGACT ACGACAAATT CATCGAGACC
GTGAAATCCA ACGAGATCAT TCGCGGCAAG CTGCTGTCCG ACGACGGCAC GCTGGCGCTG
GTCGTGCTGT CGCTGCAGCC GTCGATCGTC GAAAGCAGCG GGTTGAGCAC CACTGTCGGG
CAGATCCGCA AGGTCATGAA CGACGATCTC GCCTCCACCG GCCTCACCAA AGAGCTTTCC
GGCGTGCCGG TGATGCAGCT GGAAATCCGC AACGCGGTGG AGCGCGACGG CATCATCTAC
AACGTCGCCG GCATTCTGGC CGGCTGTCTG ATCGCGATCG TGTTCTTCCG CAAGGTCTCC
TTCATGGTCG CCGCGGCGTT CCCGCCGCTG CTGGCGATCC TGCTGGCGTT GGGGGTGCTG
GGCTGGGCCG GTTTCAGCCT CAACATGTTC CTCAACGTGA TGACCCCGCT GATCATGGTC
ATCAGTTTTT CCGATTCGAT GCAGTTGACG TTCGCGGCGC GCGACCGCCT GATCGCGGGC
GAGGACAAGT ATTCCGCGTT CCGCAACGCC GTTCTGGTGG TAGGCCCGGC CTGCGTGCTG
ACCCATGCGA CCGCGGGAAT CTCGTTCATC GCGCTGCAGT TCTCGAATTC GGACCTGATC
CGCAGTTTTG GCGAGGCAGG CCTGCTGGCG ACCGTCATCG CGCTGCTCGC GGTGCTGTTG
CTGGTGCCGG TGTTCGGGGT TCTGCTGGTG CGCAACGAAC AGCGTTTCGC GGAGAAATTC
AAAACGTCGG ATTGGGGCGT GCAGGTATTG CGCCGCTTCT GCGCCTGGAT CGCGGTGCGG
ATGGTGGGGC ATCCCGGCTT ATTCAGCCTG CTTGCCCTGG TGGTGGTCGG CGGCCTCGCG
GTGGTCTACG CCAACCTCGA GCCGCGTTAC CGGCTCGCGG ATCAGGTGCC GGACAAGCAG
CAGGCGGTGG CGGCCAGCAG CCGCCTCGAC GCAAAACTCA CCGGCGCCAA CCCGATCGAT
GTCCTGATCG AATTCCCCAA GGGCGAGACG CTGTATTCGC CGCAGACGCT TGCCACTATC
GCCGAGGTCC ACAAGCTGGT CGAGGAGCAG GCCGGCGTCG GCAACGTCTG GTCGCTCGAA
ACGCTGCGGC GGTGGCTCGC CGAGAAGGCC GGCAGCCACG ATGTTGCGAC GCTCAAGGAA
TATGTCAACG TCCTCCCCAA GCATCTGGTG CGGCGCTTTA TTTCGGAGGA CCAGACGGCG
GTCGTGGTGT CAGGTCGCGT CCCCGACCGC GACTCGAGCC AGATTCTGCC GGTGGTGGAG
AAGCTCGACC ACGCCATGGA CGCGGTCCGG AACGCGCACC CAGGTTATGA GATCGCCGTC
ACCGGCCTGT CGGCCATCGC CGCGCGCAAC AGCGCCAGCA TGATCGAGAA GCTCAACCAC
GGTCTCACGA TCGAGTTTGC GCTGGTCGCG GTGTTCATGG GGCTGGCATT CCGCTCGGTC
GTTGTGATGT TTGCCTGCAT CCTGCCCGGG ATTTTTCCGG TCGTGCTGTC CGGCACGGTG
CTGTGGGCGC TCGGGGAGGG GTTGCAGTTC GCGAGCGTGG TCGCGCTCAC GGTCTCGTTC
GGCCTCGGGC TCAGTGCGAC CATCCACTTC CTCAACCGCC TGCGATCCGA GAGCAAGCCT
GGCGTCAGCG CCGGCGAGGC GGTCGAGCGC GCGACCGTGC TGATGGGGCC GGCGCTGATC
CTGACCACCG TGGTGCTGGC GTGCGGTCTG GTGGTGACGG TGTTCTCGGA TCTGCCGTCG
CTGCGGCTGT TCGGCTGGCT CAGCGCCTTC GCCATGGTCG CCGCCCTGGC CGCGGACTTC
CTGATTTTGC GCCCGACGGC GATGTGGCTG ATCACCTTTG CGGAGCGGTT GCGCGGCGGC
GGCCAGGCGA AAGCGCTGAA ATAG
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| Protein sequence | MLERNRDADQ GAPIDRSLSI AFGLERIGLI AVRAPILSCI ILLAMVIGAV FGIQRIKIDD
SLSQLFRSDT KEYHQYEEVT KRFPSSEFDV LVVVEGKALL ERDNLEKLRD MVTDLQLVDG
VRGLISLFSA RQAPEPGKLP AALFPSELPQ GADYDKFIET VKSNEIIRGK LLSDDGTLAL
VVLSLQPSIV ESSGLSTTVG QIRKVMNDDL ASTGLTKELS GVPVMQLEIR NAVERDGIIY
NVAGILAGCL IAIVFFRKVS FMVAAAFPPL LAILLALGVL GWAGFSLNMF LNVMTPLIMV
ISFSDSMQLT FAARDRLIAG EDKYSAFRNA VLVVGPACVL THATAGISFI ALQFSNSDLI
RSFGEAGLLA TVIALLAVLL LVPVFGVLLV RNEQRFAEKF KTSDWGVQVL RRFCAWIAVR
MVGHPGLFSL LALVVVGGLA VVYANLEPRY RLADQVPDKQ QAVAASSRLD AKLTGANPID
VLIEFPKGET LYSPQTLATI AEVHKLVEEQ AGVGNVWSLE TLRRWLAEKA GSHDVATLKE
YVNVLPKHLV RRFISEDQTA VVVSGRVPDR DSSQILPVVE KLDHAMDAVR NAHPGYEIAV
TGLSAIAARN SASMIEKLNH GLTIEFALVA VFMGLAFRSV VVMFACILPG IFPVVLSGTV
LWALGEGLQF ASVVALTVSF GLGLSATIHF LNRLRSESKP GVSAGEAVER ATVLMGPALI
LTTVVLACGL VVTVFSDLPS LRLFGWLSAF AMVAALAADF LILRPTAMWL ITFAERLRGG
GQAKALK
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