| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2644 |
|---|
| Symbol | |
|---|
| ID | 4029505 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | + |
|---|
| Start bp | 2907126 |
|---|
| End bp | 2907788 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637971098 |
|---|
| Product | peptidase C15, pyroglutamyl peptidase I |
|---|
| Protein accession | YP_577885 |
|---|
| Protein GI | 92118156 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG2039] Pyrrolidone-carboxylate peptidase (N-terminal pyroglutamyl peptidase) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.808303 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACCGGCA ATCTTCGCAT CCTCGTCACC GGTTTCGGCC CCTTCCCCGG CGCGGCGTTC
AATCCGACCA TGCCGCTGGT CGAGCGGCTC GCGAAGCTGC GCCGGCCCGC GCTGGATGAT
GTCGCGATTG CAACCCACAT CTTCGATGTC GCTTACGCGA CGGTGGATCG CGAACTGCCG
CAACTTCTTG CAGCACATCG TCCGCACGCT CTGCTGATGT TCGGCCTCGC GGCGCGCACA
CCCTGGCTGC AGATCGAAAC CCGCGCGCGC AATGCGGTGA CGACGATCTG GCCGGACCAG
GGCGGCACGC GGGTGGGCAA AAGATCAATC GCGGGCACCG CGGACGCGCG CACCTTCGGA
CCGCATGTCT TCAGGCTGCT GCGCGCGGCG CTGGCGACCG GCATCGACGC GCGCGCCTCG
CGCGACGCCG GCAGCTATCT CTGCAATTAC CTCTGCTGGC GCGCCATCGA GGCCACTCAT
CATCGAACGG GAACGCGCCT GGCCGCCTTC GTTCATGTTC CGCCGCTGAG GCGCGACGGC
TCGGCCCGCG TCCCCGGCGG CCTCACGCTT GACCATCTCG TCGATGCCAG CGAGGCGATG
CTGCTGGAGA TGGCGAAAGC GGCACGGCAG GCGGACCGCG CCTGGAATCC ACGCCGATTG
TGA
|
|---|
| Protein sequence | MTGNLRILVT GFGPFPGAAF NPTMPLVERL AKLRRPALDD VAIATHIFDV AYATVDRELP
QLLAAHRPHA LLMFGLAART PWLQIETRAR NAVTTIWPDQ GGTRVGKRSI AGTADARTFG
PHVFRLLRAA LATGIDARAS RDAGSYLCNY LCWRAIEATH HRTGTRLAAF VHVPPLRRDG
SARVPGGLTL DHLVDASEAM LLEMAKAARQ ADRAWNPRRL
|
|---|
| |