Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2636 |
Symbol | |
ID | 4032836 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 2896037 |
End bp | 2897926 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637971090 |
Product | methylmalonyl-CoA mutase |
Protein accession | YP_577877 |
Protein GI | 92118148 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1884] Methylmalonyl-CoA mutase, N-terminal domain/subunit |
TIGRFAM ID | [TIGR00641] methylmalonyl-CoA mutase N-terminal domain [TIGR00642] methylmalonyl-CoA mutase, heterodimeric type, beta chain |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.668897 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCCGCTG CCCCCGACGA CGCCGTTGCC GATCCGCCGC TGGCCGCCGA TTTCGCACCG GCTACCGCCG CCGACTGGCG CAAGCTGGTC GATGGCGTCC TGAAAGGCGC GCCCTTTGAG AAGCTGGTCG CCAGGACCTA TGACGGTCTC AGGATCGAAC CGATCTATCC GCGCGCACAG AACGCGCACG CGATCGGCGG TCGCGCTGCA GCAGTGCCAT GGCGGATCAT GCAGCGGATC GATCATCCCG ACGCCGCTCA GGCCAACGCG CAGGCGCTGC ACGACCTCGA CAACGGCGCT GGCGGCCTGA CGCTGGTGTT CGCTGGCGCC AATGGCGCGC ACGGGTTCGG GCTGCCGCCG ACCCCGGAGG CTATCGCGAA AATTCTCGAT GGCGTTTTTC TCGACGCAGG CATCTCCATC GCGTTGCAGA TCGGCCCGCA GTCGCGGATG GCCGCGATCC ATCTCGCCGA TTACGTCAAG GGCAAGGACA TCGATCCCGC CGCCTGCGAT ATCCGCTTCG GTCTCGATCC GCTCGGCGCC TGCGCGGTGT CGGGATCGAG TCCGTATACG TGGCCCGAAA TCATCCCAGT GGTGGCCGGT GCTGCGAACA GTCTCGCCGC CGCGGGCTTC AAGGGTCCCT TCATTGTCGC CGACGGCCGG GTGATCCACG ACGCCGGCGG ATCGGAGGCG CAGGAACTCG CCTTCGTGCT GGCATCGGCG GTCGCATATC TCCGTGGCCT CGAAAGCGCC GGGACCGCGC TCGAGAATGC GCGCGGCCTG ATCTACGCGC GGCTCAGCGC CGACGCCGAC CAGTTTCTGA CGCTGGCCAA ATTCCGCGCG TTGCGGCTGT TGTGGGCGCG GATCGAGCAG GCTTGCGGCC TCGCGCCAAA GCCGTTGTTC ATCGCCGCCG AGACCGCGTG GCGGATGCTG ACCCGGCGCG ACCCTTACGT GAATATGCTG CGCGCCACCA TCGCCACGTT TTCGGCAGGG CTCGGCGGCG CCGACAGCCT CACCGTGCTG CCGCATACGC TGGCGCTGGG CCTGCCCGAC GACTTCGCGC GCCGCATCGC CCGCAACACG CAGTTCATTC TGCTGGAGGA ATCCAGCCTC GCCAAAGTGG CCGATCCGGC GGCAGGTTCA GGCGGCATCG AGACGCTGAC GCGGCAGCTT TGCGAAGCAG CCTGGGCGTT GTTTCAGGAG ATAGAGAAAG CAGGTGGGGC GTTCGCGGCG CTGACGCAAA GCCTCATTCA GCGCAATGTT GTCGCGACTC GCGCGGCGCG CGAGGCCAAT GTCGCAAAAC GGCGCGACGT GCTCACCGGC GCCAGCGAAT TTCCCAACCT GCATGAGAAG CCTCCAGAAG TGCTGGATGC GAAGCCGGTC ATACTCGCGC CCTACGGCGA GACAAAAATC AAATTCGATG CGCTGGCGCC GATGCGGCTC GCCGCACCCT ATGAAAAGCT ACGCGACCGC TCCGATGCGA TGCTTGCAGC GATCGGCGCG CGGCCGAAAG TCTTTCTCGC CACTCTCGGC ACCGCCGCCG ACTTTACCGC GCGCGCCACC TTCGCCCGGA GCTTCTTCGA GACCGGCGGC ATCGAGGCGG TCGATCCTCC CTCACCTCTC GACGTAAAGA CAGCCGCCCT CGCCGCCGCC TTCAGGGCGT CCGGCGCACA ATTGGTCTGC CTGTGCTCTT CGGACCATGT CTATGCCGAT CAGGCGGCCG CCGCGGTGCA GGCCTTTCAT GCCGCGGGCG CACGCCATAT CTATCTGGCA GGGCCGCCGG GAAAGCTGGA AACTGCGCTG CGCTCGGCCG GCGTGCAGGA TTTCATCTTC GCGGGCGGCG ATGCATTGGC GGTGTTGAGC GACGCCTGGC GGCGACTGGA GCAACGATGA
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Protein sequence | MPAAPDDAVA DPPLAADFAP ATAADWRKLV DGVLKGAPFE KLVARTYDGL RIEPIYPRAQ NAHAIGGRAA AVPWRIMQRI DHPDAAQANA QALHDLDNGA GGLTLVFAGA NGAHGFGLPP TPEAIAKILD GVFLDAGISI ALQIGPQSRM AAIHLADYVK GKDIDPAACD IRFGLDPLGA CAVSGSSPYT WPEIIPVVAG AANSLAAAGF KGPFIVADGR VIHDAGGSEA QELAFVLASA VAYLRGLESA GTALENARGL IYARLSADAD QFLTLAKFRA LRLLWARIEQ ACGLAPKPLF IAAETAWRML TRRDPYVNML RATIATFSAG LGGADSLTVL PHTLALGLPD DFARRIARNT QFILLEESSL AKVADPAAGS GGIETLTRQL CEAAWALFQE IEKAGGAFAA LTQSLIQRNV VATRAAREAN VAKRRDVLTG ASEFPNLHEK PPEVLDAKPV ILAPYGETKI KFDALAPMRL AAPYEKLRDR SDAMLAAIGA RPKVFLATLG TAADFTARAT FARSFFETGG IEAVDPPSPL DVKTAALAAA FRASGAQLVC LCSSDHVYAD QAAAAVQAFH AAGARHIYLA GPPGKLETAL RSAGVQDFIF AGGDALAVLS DAWRRLEQR
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