| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2621 |
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| Symbol | |
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| ID | 4031145 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2878954 |
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| End bp | 2881041 |
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| Gene Length | 2088 bp |
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| Protein Length | 695 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637971076 |
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| Product | TonB-dependent receptor, plug |
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| Protein accession | YP_577863 |
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| Protein GI | 92118134 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTGCCG CCTTCGTTTC CGGGCTTTAT CGCAGAAGCC TGCTTGCCTC CACCGTCCTC
GCGTCGTTGG GGTCGATCGG CCTGACTACG CCTTCCCTCG CCCAGCAATC CGCCTCTCCG
AACCTGCTGC CGCCGATTCA GATCGCGCCC CCGCTGGAGA GAACGACAGA CTCGCCGCCG
CCGTCTCACC GCGCGGTTTC GCGATCGCGC CGTGCGGCCC GCTCCGCCTC TCGACAAACC
CCCGTCGGCG ATGCCCGCGT TCCGGGCGCG ACGGCATCCG TTATCGTCAG CCCGACCGGA
ATCGTGACGC CCGCGGACCA GTTGGCAAGC TCCGTTACCG TCGTCACCGA GAAGGATATC
CAGACCCAGC AATACCGCAG CGTTCCGGAT ATCCTGAACA CGGTCCCCGG TTTGAATGTC
GTGCAAGCCG GCGGACCAGG CGCCCAGGCG TCGGTTTTCA TGCGCGGCAC CAACGCCAAC
CACACCAAGG TGATCGTCGA CGGCATCGAC ATCGGCGATC CCGGCAACAT CAATGGCGCA
TTCGACTACG CGCATCTTCT TGCGGCGGAC ATTCAGCAGA TGGAAATTCT GCGAGGCCCG
CAGAGCGGGC TCTACGGTTC CGACGCGATC GGCGGCGTGA TCTCCATCAT CACGAAGAAG
GGAGAAGGTC CGCCGCGCGC CACGGCGTCA ATCGAGGCCG GCTCGTTCAA CACCTTCAAC
CAGACGCTCG GATTGAGCGG CTCCGAACAG AACTTCAATT ACGCGGTCAA CGTCGCCCAT
CTCCATGCCG GAGACGTTCC CGTCACCCCG CCAGAGCTTC TCCCGCCGGG ACGGAAAGCA
ATCGGAAACA ACTACGACAA CAAGACCTAT TCGACCAAGC TCGGGGTCGA TCTCAATGAA
AACCTGACCG TGAATTCGGT GGTTCGCTAC ACCGACGCGA CGCTGCTGTT CACCGGGGAT
AGCGGATTTC CGAGCTTTCC CAATGCCGCG CAGAGCACGC ACGCCGTCCA GCAGCTCTTC
AACCGCGAAG AGGCCGTGTG GTCGCTGCTC GACGGACGCG TCAAGAACTA CTTCGGCGTC
AATTACACCA ACAGCAGAGG CTACGACATA AGCCCGGGAG ATCCGGTTGC GACAACCACC
ACGGGCACCC GGCTGAAATT CGACTGGCAT ACAGTCGCCG AGATTGCGCG CGATAACAAC
CTGATCGTCG GCGCCGAGCA ACAGACCGAT CGCATCGACA CCACCGATCT TGCGGCTCAG
AACGGCAACA AGGCCGGATT CATCGAGTTG CAATCGGCGT TTGCGAAACG CTTTTTCCTG
GTTGCGAATG TCCGCGAGGA CTCCAACGAC CGGTTTGGCG AGCATGGGAC CTACCGGATC
GCGCCGGCGG TTATTCTTCC CGTCACGGAA ACAAAACTGA AGGCGAGCTA CGGCACGGGG
TTCAAGGCGC CGTCGTTGAG CCAGTTGTAC CAGAACTACC CGGCTTTCAA CTTCTTCGCC
AACCCCAACC TGAAACCCGA AGAGAGCAGA GGCTACGATG CCGGTTTCGA GCAGCCGCTA
TTCAACGATC GCGTGCGGTT CGGCTCGACC TACTTCCACA ACGACATCAC CAACCTGATC
GGATACAACG ATACGTTCAC GTCATTGGTG AACGTAAACA GCGCGACAAC CGAAGGCACC
GAAACTTTCG TCTCGGCACA GATCACCGAG CGTTTCGGCA TCCGCGCGGA TTACACCTTC
ACCCGCGCCG TCGATGCCGG CACCGGCCTG CAACTGCTGC GCCGGCCCAA GGAAAAGTGG
AGCGTGACGG CGACCTGGCT CCCCGTCGAT GAATTGACGT TATCGGCAAC GGTGCTCCGC
GTCAGCAACT GGCTTGATGT CACGCGCGAC GGCTCGGCCT CCGGAATTGC CGCGCCCGGC
TATACGCTTG TGAATTTGCG TGGCGACTAC GCCATCAACG ATCAGGTCAA GGTGTTCGGG
CGGGTCGATA ATCTCTTTGA CGTCCGCTAC CAGAATCCGA CCGGATTCCT TGCGCCGGGC
CTCGGGATTT TCGGCGGCAT CCGGGTGGCG AGTGACGGGG TGCAATAG
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| Protein sequence | MSAAFVSGLY RRSLLASTVL ASLGSIGLTT PSLAQQSASP NLLPPIQIAP PLERTTDSPP
PSHRAVSRSR RAARSASRQT PVGDARVPGA TASVIVSPTG IVTPADQLAS SVTVVTEKDI
QTQQYRSVPD ILNTVPGLNV VQAGGPGAQA SVFMRGTNAN HTKVIVDGID IGDPGNINGA
FDYAHLLAAD IQQMEILRGP QSGLYGSDAI GGVISIITKK GEGPPRATAS IEAGSFNTFN
QTLGLSGSEQ NFNYAVNVAH LHAGDVPVTP PELLPPGRKA IGNNYDNKTY STKLGVDLNE
NLTVNSVVRY TDATLLFTGD SGFPSFPNAA QSTHAVQQLF NREEAVWSLL DGRVKNYFGV
NYTNSRGYDI SPGDPVATTT TGTRLKFDWH TVAEIARDNN LIVGAEQQTD RIDTTDLAAQ
NGNKAGFIEL QSAFAKRFFL VANVREDSND RFGEHGTYRI APAVILPVTE TKLKASYGTG
FKAPSLSQLY QNYPAFNFFA NPNLKPEESR GYDAGFEQPL FNDRVRFGST YFHNDITNLI
GYNDTFTSLV NVNSATTEGT ETFVSAQITE RFGIRADYTF TRAVDAGTGL QLLRRPKEKW
SVTATWLPVD ELTLSATVLR VSNWLDVTRD GSASGIAAPG YTLVNLRGDY AINDQVKVFG
RVDNLFDVRY QNPTGFLAPG LGIFGGIRVA SDGVQ
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