Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2615 |
Symbol | |
ID | 4031138 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 2872649 |
End bp | 2873770 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637971070 |
Product | extracellular ligand-binding receptor |
Protein accession | YP_577857 |
Protein GI | 92118128 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATCAT TGAAGCTGAC CGGCCTGGCC TTTTGCGCCT TACTGGCGCT TTCGACCACG ACCTTCGCCC AGGATATCAC CGTCGCGGTG GCCGGCCCGA TGACGGGCAG CGAGTCCGCT TTCGGCCGCC AGTTGCAGAA CGGCGCCGAG CAGTTCGTCG CCGATGCCAA CGATGCCGGC GGCGTGCTCA ACAAGAAGCT GAAGTTGTTC GTCGGCGACG ACGCCTGCGA TCCGAAGCAG GCGCGCTCCA TCGCCGAAAG GATCGCAAGC CGGGGTATTC CGTTCGTGGC CGGACATTTC TGCTCGTCGT CATCCATTCC GGCTTCCGAA GCCTATGCCG ACGGCAACGT GCTGCAGATC ACGCCGGCCT CCACCAACCC GCTGTTCACC GAGCGCAATC TGTGGAACGT GCTGCGCATC TGCGGTCGCG ACGACCAGCA GGGAGTCGTC GCCGCCGAAT ACATCGTCAA GAACTTCAAG GGCAAGAACG TCGCCATCCT CAACGACAAG ACCACCTACG GCAAGGGCCT CGCTGACGAG ACCAAGAAGG CGCTGAACAA GGCCGGCTTC CAGGAGAAGA TGTTCGAGTC CTACAACAAA GGTGACAAGG ACTTTAACTC CATCGTATCG CGCCTGAAGC GCGACGGCAT CGATCTGGTG TTCGTCGGCG GCTATTATCA GGAGGCGGGA TTGATCCTGC GCCAGATGCG CGACCAGGGC CTCAAGGCCA TCCTGATGGC TGGCGACGCG CTGAACGACA GGGAGTTCGC CTCGATCACC GGTCCGCTGG CCGAGGGTAC GCTGTTCACC TTCGGCCCCG ATCCGCGCAA CAAGCCGACC GCCAAGGCGA TCGTCGAGAA GTTCAAGGCT CGGGGCATCG ATCCGGAGGG CTATACCCTC TACACCTATG CGGCGATGCA GGTGTGGGCA CAGGGCGCCG CGAAGGCGGG CACGACGGAT CCCATGAAGG TGATGAAGAC CATCAAGGCG GGTGCGTGGG ATACCGTGCT CGGCAAGCTG GAATTCGATG CCAAGGGCGA CATCAAGCAG ATCAACTATG TCATCTACAA ATGGGACGAC AAGGGCAACT ATGCCGAACT CGACCCCGGC AAGGGCACCT GA
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Protein sequence | MKSLKLTGLA FCALLALSTT TFAQDITVAV AGPMTGSESA FGRQLQNGAE QFVADANDAG GVLNKKLKLF VGDDACDPKQ ARSIAERIAS RGIPFVAGHF CSSSSIPASE AYADGNVLQI TPASTNPLFT ERNLWNVLRI CGRDDQQGVV AAEYIVKNFK GKNVAILNDK TTYGKGLADE TKKALNKAGF QEKMFESYNK GDKDFNSIVS RLKRDGIDLV FVGGYYQEAG LILRQMRDQG LKAILMAGDA LNDREFASIT GPLAEGTLFT FGPDPRNKPT AKAIVEKFKA RGIDPEGYTL YTYAAMQVWA QGAAKAGTTD PMKVMKTIKA GAWDTVLGKL EFDAKGDIKQ INYVIYKWDD KGNYAELDPG KGT
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