Gene Nham_2598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2598 
Symbol 
ID4031789 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2856297 
End bp2857427 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content64% 
IMG OID637971053 
Productdolichyl-phosphate beta-D-mannosyltransferase 
Protein accessionYP_577840 
Protein GI92118111 
COG category[M] Cell wall/membrane/envelope biogenesis
[S] Function unknown 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG2246] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.625269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAAG CCATAAGACC GGCGCCGGTC GATCCATCAA CCGGAATGCC GCGCCAGCTT 
TCCGTCGTCG TGCCGACTTT CAACGAGCGC GACAACGTGG TTGCGCTGTA CCGGAAGTTG
TCGGCCGCGC TGACGGGAAT CGCGTGGGAA GCCATCTATG TCGACGACAA CTCCCCCGAC
GGGACCTTCG ACGTGGTGCG GAAGCTGGCC GCGATCGATC CGCGCGTTCG CTGCATCAGG
CGGATCGGAC GGCGCGGCCT ATCGGGCGCG TGCATCGAGG GCATTTTGGC ATCGAGCGCG
CCGTGCACCG CGGTGATGGA TGCCGACCTT CAGCACGATG AAACCCGGTT GCCGAAGATG
CTCGCGCTTC TGGAAAGCGA CGCCGCCGAC CTCGTGGTCG GCAGCCGTTA CATCGAAGGC
GGCAGCGCCG ACAGCTTCGA CAAGCAGCGC GCGGGCTTCA GCATGCTGGC AACCTCGGTC
GCGAAGCGGC TGCTGCACAT CGAGATCGCC GACCCCATGA GCGGCTTTTT CATGATCCGC
CGCGACCGCT TCGAACAGCT CGCGCCCGAG CTTTCGATCC AGGGCTTCAA GATCCTGCTC
GACGTGATCG CAACCGCGCG CGGCGCGTTG CGCGTCACGG AAATTCCCTT CACGTTCGGC
TCGCGGCTGC ACGGCGAGAG CAAGCTGGAT TCGATGGTCG CGCTGGACTT CCTCGGCCTG
GTGCTGGCGA AGCTGACGCG TGATGCGGTC TCGCTACGAT TCCTGCTGTT CGCGCTGGTC
GGGTCGGTCG GCGTCGTCGT CCATTTCGCC GGTCTGTTTG TCGCGCTTGA TGCGCTGCGA
TGGCCGTTTC CGCACTCGCA GGCTTTTGGC GCGGTCCTGG CGATGACCAG CAATTTCCTG
CTCAACAACT TCCTGACCTA TCGCGACCAG CGCCTGAAAG GGATCGGGAT CCTGCGCGGC
CTCCTTGTTT TCTACTTGGT GTGCAGCGTC GGTCTGCTCG CCAATGTCGG CGTCGCGTTC
TCGGTCTACA ATCAGGAGCC GATCTGGTGG CTGGCAGGCG CCGCCGGCGC GCTGATGGGC
GTGGTCTGGA ACTACGCGGT GTCCAGCCTG TTCGTTTGGC GCAGGCGATA G
 
Protein sequence
MNEAIRPAPV DPSTGMPRQL SVVVPTFNER DNVVALYRKL SAALTGIAWE AIYVDDNSPD 
GTFDVVRKLA AIDPRVRCIR RIGRRGLSGA CIEGILASSA PCTAVMDADL QHDETRLPKM
LALLESDAAD LVVGSRYIEG GSADSFDKQR AGFSMLATSV AKRLLHIEIA DPMSGFFMIR
RDRFEQLAPE LSIQGFKILL DVIATARGAL RVTEIPFTFG SRLHGESKLD SMVALDFLGL
VLAKLTRDAV SLRFLLFALV GSVGVVVHFA GLFVALDALR WPFPHSQAFG AVLAMTSNFL
LNNFLTYRDQ RLKGIGILRG LLVFYLVCSV GLLANVGVAF SVYNQEPIWW LAGAAGALMG
VVWNYAVSSL FVWRRR