| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2597 |
|---|
| Symbol | |
|---|
| ID | 4031788 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2854793 |
|---|
| End bp | 2856289 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637971052 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_577839 |
|---|
| Protein GI | 92118110 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTCTGA CCGGGACGCG GTCCGCCCGC GCCGTTGTTC TCACGGTCCT CGCGCTGGTG
GCGCTGCGGC TAGTCTGCGC GGCGCTGACG CCGCTGACGT TCGACGAGGC CTATTACTGG
ACCTGGTCGA AGCATCTGGC CGGCGGCTAT TACGATCATC CGCCGCTGGT GGCGATCGTG
ATCCGCCTCG GCACCATGAT CGCCGGCGAT ACCGAATTCG GCGTCCGGCT GGTCTCGATC
CTGCTGGCGC TGCCGATGAG CTTTGCGGTC TATCGCGCCA CAGTGCTGCT GTTCGACAGC
GCGCGTGCGG CGGCGACGGC AACCGTTCTT CTCAACGTCA TGCTGATGGT GGCGGCCGGC
ACCGTGATCG TGACGCCGGA CGCGCCGCTG ATGGCGGCAT CGAGTTTCGT GCTGCTGTGT
CTCGCCGAAT TGCTCGCGAC CGGACGCAGG GCCTGGTGGC TCGCGGTGGG CGCGGCTGTG
GGCGCAGCGC TGGTGTCGAA ATATACCGCG CTGTTCTTCG GTCCGGTGAT CCTTATCTGG
CTGTTGGCCG TGCCGGAATT GCGCCGCTGG CTGAGGTCGC CGTGGCCCTA TCTCGGCGGG
CTGGTCGCGC TGGCGATATT CTCGCCGGTC GTGATCTGGA ACGCCGACCA CCATTGGGTG
TCGTTCGCCA AGCAGTTCGG CCGCGCGCGC GTGGACCAGT TCACCCTTCG CTACATTATC
GAGTTGATCC CGACGCAAAT CGCCTTCGCG ACCCCGCCGG TGTTCGTTCT CGCCGCGATG
GGGCTATTTG CATTGTCGAA GCGCGACGAG GGCACGCGGG CCGCGCGGGC GCTGATCAGC
GCGACGGTCT GGACGCTGAC GATCTATTTC GTCTGGCATT CGCTGCACGC TCGCGTCGAG
GCCAACTGGT TCGGGCCGAT CTATCCGGCA CTGGCGGTCG CAGCCGCGGT GGCCGCCGAC
GTCACGCGCT GGAAGCCGCG CGGCCGGCAT ATCGCCGATG TCTGCCGCCG CTGGGCGGTG
CCGGTGGGCG TTGCGATGTT GGTGGCGCTG GTGGTGCAGG TGAACACCGG CCTTCTCTCA
GGATATCGGC GCGATGCCTC GGTGCGCAGC GTCGGTGTCG GCTGGCGCGG GCTTGCCACT
GAGATCGAGG CGGTGCGCGC GAAAACCGGC GCGCGCTGCG TACTGGCTCA AAGCTATGGC
GTCGCGAGCT GGCTTCGGTT TTACCTGCCG AAGGATACTT GCGTGGTGCA GCGTTTCGAG
CGCATCCGCT GGATCAACGG TCCGCAGCCG GCAGCCGACC AGCTCACGGG CAAACTGCTC
TATGTCGATG ACGGATTGGA AGGGTGGGGG CGCCCCGCGC GGTATTTCAA TCACGTCGAG
AAGGTTGCAA CCCTGGAACG CAAGCGCGGG CCCCTGACGG TCGAGACCTT CGAGATCGAT
GTGGTGGCGG ACCCCAAGGG CGACGTGCTC GAGCCGCTAC CGGCGGGGCT GAAGTAG
|
|---|
| Protein sequence | MGLTGTRSAR AVVLTVLALV ALRLVCAALT PLTFDEAYYW TWSKHLAGGY YDHPPLVAIV
IRLGTMIAGD TEFGVRLVSI LLALPMSFAV YRATVLLFDS ARAAATATVL LNVMLMVAAG
TVIVTPDAPL MAASSFVLLC LAELLATGRR AWWLAVGAAV GAALVSKYTA LFFGPVILIW
LLAVPELRRW LRSPWPYLGG LVALAIFSPV VIWNADHHWV SFAKQFGRAR VDQFTLRYII
ELIPTQIAFA TPPVFVLAAM GLFALSKRDE GTRAARALIS ATVWTLTIYF VWHSLHARVE
ANWFGPIYPA LAVAAAVAAD VTRWKPRGRH IADVCRRWAV PVGVAMLVAL VVQVNTGLLS
GYRRDASVRS VGVGWRGLAT EIEAVRAKTG ARCVLAQSYG VASWLRFYLP KDTCVVQRFE
RIRWINGPQP AADQLTGKLL YVDDGLEGWG RPARYFNHVE KVATLERKRG PLTVETFEID
VVADPKGDVL EPLPAGLK
|
|---|
| |