Gene Nham_2572 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2572 
Symbol 
ID4031976 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp2833281 
End bp2833901 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content62% 
IMG OID637971026 
Producttransglutaminase-like cysteine peptidase, BTLCP 
Protein accessionYP_577814 
Protein GI92118085 
COG category[S] Function unknown 
COG ID[COG3672] Predicted periplasmic protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCAACA GGGGACAGGG AGTGGGACTG GCGGTCGCTG CCGCCGTCCT GTGGGGGATG 
GCGACGCAGG CGAGCGCCGG GGAAGCGCGG CAACTTTATG CAAGTCTTGG CAGCACCACG 
CGGGCGCCGA TCGGCTGGGT CGAATTCTGC GGCGAAAATC CGAAGGAATG CCACAACGGC 
GCAACGCAGC CGCGGGATAT CGTTTTGACG ACTGACGCCT GGCGCGATCT TTTGAAGGTC 
AACCGCTGGG TCAACGAAAC CATCAAGCCG ATGACGGACA AGGATCACTG GGGCGTCGTC 
GAAAAGTGGT CGCTGCCGAC CGACGGCTAC GGCGATTGCG AGGACTACGT CCTGTTGAAA 
CGCAAGATGC TGATCGACGC GGGCTGGCCG CGCGAGGCGT TGCTGGTCAC GGTGGTTCGC 
GACAAGCAGG GCGACGGTCA TGCCGTCCTG ACCGTCAAAA CCGACAAGGG CGAGTTCATT 
CTCGACAACC AGAACGAGGA CGTCCTGGCC TGGACCAAGA CCGGCTACCG CTTCATGAAA 
CGGCAATCGC AAAGCGACCC CGATGTCTGG GTTGCGCTCG ACGACAACCA TCCGGCGGTC 
GCGACGGCCA GCTCACGATA A
 
Protein sequence
MLNRGQGVGL AVAAAVLWGM ATQASAGEAR QLYASLGSTT RAPIGWVEFC GENPKECHNG 
ATQPRDIVLT TDAWRDLLKV NRWVNETIKP MTDKDHWGVV EKWSLPTDGY GDCEDYVLLK 
RKMLIDAGWP REALLVTVVR DKQGDGHAVL TVKTDKGEFI LDNQNEDVLA WTKTGYRFMK 
RQSQSDPDVW VALDDNHPAV ATASSR