| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2567 |
|---|
| Symbol | |
|---|
| ID | 4032222 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2828479 |
|---|
| End bp | 2829417 |
|---|
| Gene Length | 939 bp |
|---|
| Protein Length | 312 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637971021 |
|---|
| Product | import inner membrane translocase, subunit Tim44 |
|---|
| Protein accession | YP_577809 |
|---|
| Protein GI | 92118080 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4395] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAA TCCAACGGGC GTCCGGCGTG ATGAAGGCCT TCGCCATCGT CCTGTCGCTG
GCGCTCCCCT TGATGTTTGC CGTCTCCGCG GCGGACGCTC GAATCGGTGG AGGCAAGAGC
TTTGGATCGC GCGGCTCGCG AACCTTCTCC GCGCCGCCGG TCACCAACAC CGCGCCGAAC
GCGGCGCGTC CGCTCGACCG GTCCATGGCC CAGCCCGGCC GCCCGGGCGC CGGCGCTGCC
GCGACGGGTG GCTTCAAGCG GCCCGGCATG GGCATGCTCG GCGGCCTTGC CGCCGGCTTC
CTCGGTGCGG GACTGCTCGG CATGCTGTTC GGCGGCGGCC TGTTCGGCGG CCTCGGCGGC
CTGTCGTCCA TGATCGGGCT TTTACTTCAG ATCGGTCTGA TCGTCCTCGT CGTCCGCTTT
GCGATGTCGT GGTGGCGGCG GCGCAATGCG CCCGCTTATG CTGGAGCTGC GCCGGGTCCC
GCTGCTCAGG CGAGCCCCCG CAGCGGCTTC GGTTTCGCTT CGGCATCGAA CGCCCCGCCG
CTGGAGATCA CCCCGTCCGA CTATGAAGCC TTCGAGCGTC TGCTCGGAGA AATTCAGACT
GCGTGGTCGA ACGAGGACGT CAACACGCTG CACACGCTGG CGACGCCGGA AATGGTGTCG
TACTTCACCG AGGATCTCCG GGCCAACGAC GCCCGCGGCG TCGTCAACAA GGTATCCGAC
GTCAAGCTTC TGCAGGGCGA TCTCGCGGAA GCCTGGCGTG AGGGCACTAC CGATTACGCC
ACGGTGGCGT TGCGCTATTC GCTGATCGAC AAGACCACCG AGCGCGCGAG CGGCCGCGTG
GTCGAAGGCA GCGATCAGCC GCAGGAGGTG ACCGACGTCT GGACGTTCGC GCGCCTTGGC
GGCGGAAAAT GGGAACTGTC CGCGATCCAG CAGACCTGA
|
|---|
| Protein sequence | MKLIQRASGV MKAFAIVLSL ALPLMFAVSA ADARIGGGKS FGSRGSRTFS APPVTNTAPN
AARPLDRSMA QPGRPGAGAA ATGGFKRPGM GMLGGLAAGF LGAGLLGMLF GGGLFGGLGG
LSSMIGLLLQ IGLIVLVVRF AMSWWRRRNA PAYAGAAPGP AAQASPRSGF GFASASNAPP
LEITPSDYEA FERLLGEIQT AWSNEDVNTL HTLATPEMVS YFTEDLRAND ARGVVNKVSD
VKLLQGDLAE AWREGTTDYA TVALRYSLID KTTERASGRV VEGSDQPQEV TDVWTFARLG
GGKWELSAIQ QT
|
|---|
| |