Gene Nham_2560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2560 
Symbol 
ID4032215 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2822244 
End bp2823413 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content65% 
IMG OID637971014 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_577802 
Protein GI92118073 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.800348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCA GCATAGTAGG GTGGGCGCAC ACGCCGTTCG GGAAATTGGG CGCAGAGACC 
GTCGAAAGCC TTGTGGTGAA GGTCGCAACC GACGCGCTGG CCGATGCCGG CATTTCCGCC
GGCGACGTCG ACGAGATCGT GCTCGGGCAT TTTAATGCCG GCTTCTCGGC CCAGGATTTT
ACCGCCTCTC TTGTCTTGCA AGCCGATCCG GAACTCCGCT TCAAGCCGGC GACGCGGGTG
GAGAACGCCT GCGCCACCGG ATCGGCGGCG GTGCATCAGG GTGTCCGCGC CATCGCGTCG
GGCGCGGCGA AGATCGTGCT GGTCGTCGGC GTCGAGCAGA TGACGCACAC ACCCGGTCTC
GAGGTCGGCC GCAATCTGCT GCGCGCCTCT TATCTGCCCG AGGACGGCGA TACCCCGGGC
GGTTTTGCCG GCGTTTTCGG CAAGATCGCG CAGGCCTATT TCCAGAAATA TGGCGACCAG
TCGGATGCCC TGGCGATGAT CGCGGCGAAA AACCACAAGA ATGGGGTCGC CAACCCTTAC
GCGCAGATAC GCAGGGATTT CGGCTACGAC TTCTGCCGCT CCGAGAGCGA GAAGAACCCG
TTCGTTGCGG GGCCGCTGAA GCGCACCGAC TGCTCGCCGG TGTCGGACGG CGCGGCCGCG
CTGGTGCTGA TGGATGTGGA GACGGCCCGA TCCATGCGCA GGGCGGTCAA CATCCGCGCG
ACCGGCCACG CGCAGGATTT CCTGCCGATG TCGAAGCGCA ACATCCTCGA TTTCGAGGGC
TGCACGGTGG CGTGGCAGCG GGCGCTGGCG AAGGCCGGTG TGACGCTGTC CGATCTCTCG
TTCGTCGAGA CCCACGACTG CTTCACCGTC GCCGAACTGA TCGAGTACGA AGCCATGGGC
CTGACGCCGA AGGGGCAGGG CGCGCGCGCC ATCAAGGAAG GCTGGACCCG GAAGGACGGC
AAGCTGCCGA TCAATCCGTC CGGCGGCCTC AAGGCCAAGG GCCATCCGAT CGGCGCCACC
GGAGTCTCCA TGCACGTGCT GAGCGCGATG CAGCTCGCTG GCGAGGCGCC CGAGGGTATG
CAGATCAGGG ACGCCAGGCT CGCCGGCATC TTCAACATGG GCGGTACAGC GGTTGCGAAC
TACGTCTCGA TCCTTGAGCC GGTGCGATAG
 
Protein sequence
MTASIVGWAH TPFGKLGAET VESLVVKVAT DALADAGISA GDVDEIVLGH FNAGFSAQDF 
TASLVLQADP ELRFKPATRV ENACATGSAA VHQGVRAIAS GAAKIVLVVG VEQMTHTPGL
EVGRNLLRAS YLPEDGDTPG GFAGVFGKIA QAYFQKYGDQ SDALAMIAAK NHKNGVANPY
AQIRRDFGYD FCRSESEKNP FVAGPLKRTD CSPVSDGAAA LVLMDVETAR SMRRAVNIRA
TGHAQDFLPM SKRNILDFEG CTVAWQRALA KAGVTLSDLS FVETHDCFTV AELIEYEAMG
LTPKGQGARA IKEGWTRKDG KLPINPSGGL KAKGHPIGAT GVSMHVLSAM QLAGEAPEGM
QIRDARLAGI FNMGGTAVAN YVSILEPVR