| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2548 |
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| Symbol | |
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| ID | 4032203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2807886 |
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| End bp | 2809358 |
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| Gene Length | 1473 bp |
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| Protein Length | 490 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637971002 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_577790 |
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| Protein GI | 92118061 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGG AACGCCTGAT CCCGCTCATC GTCGCCGCCG CCTTGTTTAT GGAAAACATG
GACTCCACGG TGATCGCGAC CTCGCTGCCG GCGATCGCCA ACGACATCGG CACCAGTCCG
CTGACGCTGA AGCTCGCGAT CACCTCCTAT CTGCTGTCGC TGGCGATCTT CATTCCGGCG
AGCGGCTGGA CCGCGGACCG GTTCGGGGCG CGCACCGTAT TCAGCATGGC GATCGCCGTG
TTCATGCTCG GTTCGATCGG CTGCGCATTG TCGTCGTCGG TGACGGATTT CGTGATCGCG
CGGAGTCTGC AAGGGCTCGG CGGCGCGATG ATGACGCCGG TCGGGCGTCT GGTGCTGCTG
CGCTCGATCG ACAAGAGCGC GCTCGTCAAC GCGATGGCGT GGGTGACGGT GCCCGCCATG
ATCGGGCCGG TGGTCGGTCC GCCGCTTGGC GGCTTCATCA CCACCTATTT CTCGTGGCAC
TGGATCTTCC TGATCAACAT TCCGGTTGGC CTGCTCGGCA TCGTGCTGGC GCAGCGCTTC
ATCGATCCGA TCCGCAGCGA GAACCCCGAA CGCTTCGACC TCTACGGCAT GGTGCTGGCC
GGCGTCGGGC TCGGCGGCAT CGCCTTCGGC CTGTCGGTCG CCGGTCTCAA CCTGCTGCCG
TGGACGGTGG TGATCGCGCT GATCGGCGTC GGCTCGGTCT CGATGACGCT TTATGTGGTG
CACGCCCGGC GCACCGACTC GCCGGTTCTG GATCTCACGC TGCTGCGCCT GCCGACGTTC
CGTGCCAGCA TCTATGGCGG GTTCCTGTTC CGCCTCGGCG TCGGTGCGCT GCCGTTTCTG
CTGCCACTCC TGATGCAAGT CGGTTTCGGA CTGTCGCCGT TCGGCTCGGG ACTGGTGACA
TTCTCGTCGG CCGTCGGCTC CATGGGCATG AAAACGCTCG CCGCCCGCAT CATCCGCACC
TTCGGCTTCC GCAACATCAT GACCGTCAAT GCGATCGTCA GCTCGGTCTT CCTCGCGGCC
TGCGCGCTGT TCACCATCAC GACGCCGCTG CTGCTGATCA TGATCATTCT CGTCGTCGGC
GGTTTCTTCC GCTCGCTGCA GTTCACCGCG ATCAATACGC TGGCCTATGC CGACGTCGAG
CCGGAGCAGA TGAGCCGCGC CACCACGATG GCCAGCGTCA ACCAGCAACT GGCGGTTTCG
GCGGGCGTCG CGGTCGGCGC CTTCTCGGTG GAATCCGCGA TGCTGTTCCA TCACAGCGCG
GAACTCACGG CTACTGATTT CGGACCTGGA TTCCTCGTGG TCGCGGTGCT TGCAGCGACG
TCCACCTATT ACTTCTTCAG GATGCCCGCC GATGCCGGCC ATCAGGTGTC GGGGCGGCGC
ATGGTGGTGA TTTCCGATCC CACCCGCGAG GCCGAGGCCG AGGAAGAAGC CGCGCGCGAG
ACCGTCACCG CGCGCGATCA GAAACTGAGC TGA
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| Protein sequence | MNKERLIPLI VAAALFMENM DSTVIATSLP AIANDIGTSP LTLKLAITSY LLSLAIFIPA
SGWTADRFGA RTVFSMAIAV FMLGSIGCAL SSSVTDFVIA RSLQGLGGAM MTPVGRLVLL
RSIDKSALVN AMAWVTVPAM IGPVVGPPLG GFITTYFSWH WIFLINIPVG LLGIVLAQRF
IDPIRSENPE RFDLYGMVLA GVGLGGIAFG LSVAGLNLLP WTVVIALIGV GSVSMTLYVV
HARRTDSPVL DLTLLRLPTF RASIYGGFLF RLGVGALPFL LPLLMQVGFG LSPFGSGLVT
FSSAVGSMGM KTLAARIIRT FGFRNIMTVN AIVSSVFLAA CALFTITTPL LLIMIILVVG
GFFRSLQFTA INTLAYADVE PEQMSRATTM ASVNQQLAVS AGVAVGAFSV ESAMLFHHSA
ELTATDFGPG FLVVAVLAAT STYYFFRMPA DAGHQVSGRR MVVISDPTRE AEAEEEAARE
TVTARDQKLS
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