| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2543 |
|---|
| Symbol | |
|---|
| ID | 4033219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2803022 |
|---|
| End bp | 2804323 |
|---|
| Gene Length | 1302 bp |
|---|
| Protein Length | 433 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637970997 |
|---|
| Product | Fmu (Sun) |
|---|
| Protein accession | YP_577785 |
|---|
| Protein GI | 92118056 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0144] tRNA and rRNA cytosine-C5-methylases |
|---|
| TIGRFAM ID | [TIGR00563] ribosomal RNA small subunit methyltransferase RsmB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.262897 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACGCCAG CCGCGCGGCT CTCCGCCGCT ATTGAAGTGA TCGAGGCCAT CGACAGCGAG
CGGGTGCCGG CGGCGAAGGC GCTGAAGGAA TGGGGCACGG CGCACCGCTT CGCCGGCTCC
GGCGACCGCG CCGCGATCTC CGGGCTGGTC TACGACGTGC TGCGCCGTCA GGCGTCCAGC
GCCTGGATCA TGGACGCCGC CGCGCCGCGT TCGCGCCTGC TCGGAATGCT GAAGCTCGAG
CGAGGGCTGG ACGCCGATGC CATCGCGGCG CTGTGCGATG GTAGCCGCTT TGCGCCCGCA
CCGCTCTCCG AGGGTGAACG CGCGGCGCTG GTCTCGCGCA CCGTCACGGA CGCGCCCGCG
CATATCGCCG GCGATTATCC GGAATGGCTG GACGGATATC TGGCGGACGT GTTCGGTGAC
GACCGTGCCG CCGAGGCCGC GGCGATGGCG AGCCGCGCGC CGCTCGACCT GCGCGTCAAT
ACGCTGAAGG CGAAGCCTGA GAAGGTGTTG GGCTCGCTGC GGCACCTTAA TGCAACAGCG
ACGCCGTGGT CGCCGCTGGG CTTAAGGATC ACGCTTGGCG CCGACGCGCG TAATCCCGGT
GTCCATGCCG AGGAGGATTT CATAAAGGGC GGCATTGAGG TGCAGGACGA GGGCTCGCAG
CTCGCGGCGA TGCTGTCCGG AGCAAAACCC GGCGAGCAGG TGATCGATCT CTGCGCCGGG
GCCGGCGGCA AGACCCTGGC GCTGGCAGCG ATGATGCAGG GCAGAGGCCG CCTCATTGCA
ACCGATCGCG ACAAACGCCA GCTTGCCCCG ATCCACGAGC GACTGTCGCG CGCCGGCGTG
CACAATGCCG ATGTCCGGAC CCCGAAGGGC GCGGACGATC CGTTGTCCGA TATCAGGGCG
TCGGCCGATC TTGTGCTGAT CGACGCGCCT TGCACCGGGA CCGGCACCTG GCGGCGCAAT
CCCGACGCGA AATGGCGGAT GCGCGCGGGC GCGCTTGAAG TACGGTTGAA AGACCAGATC
GAAGCGCTTG ATCGCGCAGC CGCTTTGGTG AAGCCCGGCG GGCGTATCGC CTACATCACC
TGCTCGGTGC TACCGCCGGA AAATAGCGAG CAAGTCCGTA AGTTTATTGG CCGTCATTCA
GATTTCACCG TGACACCGCC GGCGCAGGCT GCGTCCGTGT TGTGGGACAA GACGGACGAG
TTTCTCGCGG CAACATACCA GTCCGACGAG GGCCTGCTGA TGACACCGCG CCGGACCGGA
ACGGACGGGT TTTTCATCAG CGTCTTGCAC AAGAAAGCCT GA
|
|---|
| Protein sequence | MTPAARLSAA IEVIEAIDSE RVPAAKALKE WGTAHRFAGS GDRAAISGLV YDVLRRQASS
AWIMDAAAPR SRLLGMLKLE RGLDADAIAA LCDGSRFAPA PLSEGERAAL VSRTVTDAPA
HIAGDYPEWL DGYLADVFGD DRAAEAAAMA SRAPLDLRVN TLKAKPEKVL GSLRHLNATA
TPWSPLGLRI TLGADARNPG VHAEEDFIKG GIEVQDEGSQ LAAMLSGAKP GEQVIDLCAG
AGGKTLALAA MMQGRGRLIA TDRDKRQLAP IHERLSRAGV HNADVRTPKG ADDPLSDIRA
SADLVLIDAP CTGTGTWRRN PDAKWRMRAG ALEVRLKDQI EALDRAAALV KPGGRIAYIT
CSVLPPENSE QVRKFIGRHS DFTVTPPAQA ASVLWDKTDE FLAATYQSDE GLLMTPRRTG
TDGFFISVLH KKA
|
|---|
| |