Gene Nham_2517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2517 
Symbol 
ID4029738 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp2771007 
End bp2771450 
Gene Length444 bp 
Protein Length147 aa 
Translation table11 
GC content54% 
IMG OID637970972 
ProductDNA mismatch endonuclease vsr 
Protein accessionYP_577760 
Protein GI92118031 
COG category[L] Replication, recombination and repair 
COG ID[COG3727] DNA G:T-mismatch repair endonuclease 
TIGRFAM ID[TIGR00632] DNA mismatch endonuclease Vsr 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.654649 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGTAGACC GACTGACGCC AGAACGACGA TCCTGGCTGA TGTCTCGCGT AGGCGGCAAA 
AACACCACGC CTGAAATCGT GGTGAGAAAG GTTGCTCACT CGCTAGGATT ACGATTCCGC 
CTCCATCGAA AACAACTGCC AGGAACGCCG GATCTTGTTT TTCCCAAGTG GCGGACGGCA 
ATCTTCGTCC ACGGTTGCTT CTGGCATCGG CACCCGGGTT GCGCGAAGGC AAGCACCCCC 
AAAAGCCGAA CCGAATACTG GCAGGACAAA TTCGAAACGA ACGTCCGGCG CGACAAGAAA 
AATGTTGCAC TATTGCGCAA GCAGGGCTGG CTTGTTCTCA CTGTTTGGGA GTGCGAAACC 
AAAAACGTCG ACAAGCTCGG AGCCAAGCTC TCTCAAGCCT TCAAGAAAAG GGCTCAATAT 
ATGGTTCGCA GTACACGTGG CTAG
 
Protein sequence
MVDRLTPERR SWLMSRVGGK NTTPEIVVRK VAHSLGLRFR LHRKQLPGTP DLVFPKWRTA 
IFVHGCFWHR HPGCAKASTP KSRTEYWQDK FETNVRRDKK NVALLRKQGW LVLTVWECET 
KNVDKLGAKL SQAFKKRAQY MVRSTRG