Gene Nham_2492 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2492 
Symbol 
ID4030281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2748974 
End bp2750161 
Gene Length1188 bp 
Protein Length395 aa 
Translation table11 
GC content60% 
IMG OID637970951 
ProductPhage portal protein, HK97 
Protein accessionYP_577742 
Protein GI92118013 
COG category[S] Function unknown 
COG ID[COG4695] Phage-related protein 
TIGRFAM ID[TIGR01537] phage portal protein, HK97 family 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCATTCG TTACTCGCTT CAAATCCTTC CTAGGCCTCG AAACCAAGTC GGGCGTATCG 
AACCCCGATC CGTGGCTCTT TGAGCAGTTC AGCGGCGGCG CATCCGCTGC CGGGATCGTG
GTCACGCCCC GCACCGCCAT GGAATGCGCG CCCGTCCGGT GCGGCGTTCA GGCCATCAGC
GAGACCATCG GGCAGCTACC CCTGATCGTT TACCAGCGCG GCGCGAACGG CTCCAAAGAG
CGCGCCCCAA ATCACCCGGC CTATGCGCTC CTGCACGATG CTGCGGACCC TTCGACGCCC
GCCGCCCTGT TTCGCGAGTG GATCACTCGT GATGCGCTGC TGCGGCCTTA CGGTGGTTTT
GCGTTCATCA ATCGTGGGGC CGACGGCAAG CTGCTGGAAC TGAATTACAT CGATCCGGAA
GTTTCTCCGG TGACGGTGGA GCGGTCCACC GGTGAACCAA TCTATACGGT GCAAGAGGGG
ACCAATAAGC GGGAGATCGC CCGCGAAAAT ATCCTGCACA TTCCCAGCCC ATCTATGTCG
GGCCGTGGTC TCGCCTATGA CGCCCGCAAC GCCATCGGCC TTGCGCTGGT TCTGGAGCGC
TACGCGAACA AGCTGTTCGC GAACGGCGTC CGTCCCGGTA GCCTATTGCT CGCCAAAGAT
GCCAAGACGC CCGACGCGGT CAAAAACATC AAGGCGCTTT TCAACGCGCA ATTCTCCGGC
GACGGCACCG GCAGCAACGC TGTCCTTCCC GGCGACCTGA CTTATCAACA GCTTACATTG
AGCAGTGTGG ATGCTCAGTT CCTCGAAATG AGGAAGTTCG CGATTGAGGA AATCGCGCGC
CACCTTCGCG TCCCGCCGCA CATTCTTTAC GAAATGGGCC GTGCGACGTG GGGCAATTCG
GAAGAAATGT CCCAGCACTT CCTCGACTTC ACAATGATGC GCTGGATCAC GGCATGGGAA
GGCGAGCTTC GCTTGAAGCT GTTTGCCAAC GATCCGTCGC ACTTCGCTGA ATTCCAGACT
GACAACTTTG TTCGCGCGAA CTATGCGGCG CGCATGGAAG GCCTGTCGAA GGCCATCGCC
GCTCGCGTCC TTAATCCGAA CGAGGCGAGG GCGATTCTGA ACCTTCCGCC CTATGCCGGC
GGCGACGAAT TCATCAACCC GAACGTCCAG ACGGCAAACC TCACATGA
 
Protein sequence
MSFVTRFKSF LGLETKSGVS NPDPWLFEQF SGGASAAGIV VTPRTAMECA PVRCGVQAIS 
ETIGQLPLIV YQRGANGSKE RAPNHPAYAL LHDAADPSTP AALFREWITR DALLRPYGGF
AFINRGADGK LLELNYIDPE VSPVTVERST GEPIYTVQEG TNKREIAREN ILHIPSPSMS
GRGLAYDARN AIGLALVLER YANKLFANGV RPGSLLLAKD AKTPDAVKNI KALFNAQFSG
DGTGSNAVLP GDLTYQQLTL SSVDAQFLEM RKFAIEEIAR HLRVPPHILY EMGRATWGNS
EEMSQHFLDF TMMRWITAWE GELRLKLFAN DPSHFAEFQT DNFVRANYAA RMEGLSKAIA
ARVLNPNEAR AILNLPPYAG GDEFINPNVQ TANLT