Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2453 |
Symbol | |
ID | 4029287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2713534 |
End bp | 2714475 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637970912 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_577703 |
Protein GI | 92117974 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCAATACG CGTTGGCTAT GATGCTGATG ATGCCGCATG TCGCCTTTGC GCAAGTCGGC GCGGAGACGG CGGCCGATCC CGGACCTGCC GCCAAGACAG ATCCCGTCAA GACAGATCCC GTCAAGACAG ACCAAGACAC GCGCGAATCG ATCTGCCTGA TGGTCGAATC GGCTGCGAAG GCCGAGAGCT TGCCGCTGGA ATTCTTCGCG CGCGTGATCT GGCAGGAGAG CCGGTTTCAG TCCGATGCCG TTGGCCCGTT GACCCGCAGC GGCCAGCATG CGGAGGGAAT CGCGCAGTTC ATGCCGGGAA CGGCGAGTGA GCGGCGGCTG CTCGACCCGT TCGATCCGGT GCAGGCCCTG CCGAAATCGG CCGAGTACCT GAACGAGTTG CGCGGGCAAT TCGGCAATCT CGGACTGGCG GCCGCAGCCT ATAATGCCGG GCCGCGCCGC GTGCAGGACT GGCTTGATGG CAAGGGATCG ATGCCGACTG AGACGCGCAA CTACGTTGTC GCGATCACGG GATCGCCGAT CGAGGACTGG GTTGCCGCCG GCAAAAGCGG TAAACCGCCA GCGCAGCCAC CGGCGACGAA CTGCCGCGAG TTGATGGCGC TCCTGAAGCG CGCGCCCAAT CCGTTTGTCA CGGGGCTTGA ACAGCACGTG AAGCTCGGTG CCGACAAGCC ATGGGGCGTG CAGCTTGCTG CCGGCTTCAG CCGCGTCCGC GCCATGGCCA TGTATGCACG AGCCATCAGG CGGCTCGTCG CCGTGATCGG CGACCGCGAT CCAAGTCTGC TAGGCTCGGT ATGGCGCAGC CGCGGCACCC GGACGTTCTA TCAGGTGCGG ATCGGAGCCG ATACGCGCGC GGAAGCCGAT GGCCTCTGCA ACCGGATCAG GCGCGCCGGC GGCGCCTGTC TCGTACTGCG AAATATGCGT GTGAGAGGTT GA
|
Protein sequence | MQYALAMMLM MPHVAFAQVG AETAADPGPA AKTDPVKTDP VKTDQDTRES ICLMVESAAK AESLPLEFFA RVIWQESRFQ SDAVGPLTRS GQHAEGIAQF MPGTASERRL LDPFDPVQAL PKSAEYLNEL RGQFGNLGLA AAAYNAGPRR VQDWLDGKGS MPTETRNYVV AITGSPIEDW VAAGKSGKPP AQPPATNCRE LMALLKRAPN PFVTGLEQHV KLGADKPWGV QLAAGFSRVR AMAMYARAIR RLVAVIGDRD PSLLGSVWRS RGTRTFYQVR IGADTRAEAD GLCNRIRRAG GACLVLRNMR VRG
|
| |