Gene Nham_2421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2421 
Symbol 
ID4030364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2683374 
End bp2684159 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID637970880 
Productheat shock protein DnaJ-like 
Protein accessionYP_577671 
Protein GI92117942 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.230582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTGTCGCC GTGACCGCTT TCAACAATCG CTTTCGCCGG TTGCGCCGAC ATACTATCTA 
TCCGCCATGC CGATCCTGAT TGCAGGCCTT CTCGCCTTCG TTTTTCTGTA TTTGCTGGTT
CAGCTGCTGC GGGCTGCAAA CCCAGCCGTG CTGGCGCGAG CCATCAGGCT CGCCGGCGGC
ATCGTAGCGC TCGCGGTGGC TGCCTTTACC GGCATCAAGG GAGAACTGGT GGTTGCGCTG
CCGCTCGGGA TTTTCGGCGC CGGACTTTTG GGCTGGTCGC CGTCCAGCGC ATCGTTCTTA
GGCAGACTCT TCGGCGCGCG GACACAGCCC TCTGTGGGAA AGACGTCCCA GGTGCGTTCG
CAGTTTCTCG ACATGGTCCT GGATCACGAC AGCGGCCGTC TCGGCGGATG GATTGTTGCC
GGACCCGACG CGGGTCGCTC GCTTGACGAT TTCGACCTGC CGCAGCTTGT CGCAATGATG
ACGAGCTTCG ATGCCGAGAG CTGCGCGTTA CTTGAAAGCT ATCTGGACCG CAGGTTTCCC
GCCTGGCGTC AGAACGCGCA AGGCGATCCG GCAGGGGGGC GAAGCCGCGC GTCGTCGGGC
GGCAAAATGA CGAACGAGGA GGCCTATCAG ATCCTTGGCT TGCAGCCGGG GGCGGGTGGC
GACGAGATCC GGCGCGCGCA TCGAGGGCTC ATGAAGAAAC TGCATCCCGA CCAGGGGGGG
ACGACGTACC TGGCGGCCCG TGTAAACGAG GCCAAGGACA CTTTGCTTCG CACTCATCGC
AGCTAA
 
Protein sequence
MCRRDRFQQS LSPVAPTYYL SAMPILIAGL LAFVFLYLLV QLLRAANPAV LARAIRLAGG 
IVALAVAAFT GIKGELVVAL PLGIFGAGLL GWSPSSASFL GRLFGARTQP SVGKTSQVRS
QFLDMVLDHD SGRLGGWIVA GPDAGRSLDD FDLPQLVAMM TSFDAESCAL LESYLDRRFP
AWRQNAQGDP AGGRSRASSG GKMTNEEAYQ ILGLQPGAGG DEIRRAHRGL MKKLHPDQGG
TTYLAARVNE AKDTLLRTHR S