| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2420 |
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| Symbol | |
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| ID | 4030363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2681399 |
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| End bp | 2683159 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637970879 |
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| Product | Serine-type D-Ala-D-Ala carboxypeptidase |
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| Protein accession | YP_577670 |
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| Protein GI | 92117941 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0202661 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTTCGCA CAACCTTGGC TTCCTCGCGC GTGCTGCGAG CTGGCGCAAT CGGACTGGCG
GCACTGGCCG CCGTCGTTTT CACGATCGAC CACGCCGACG CACGCCGCGC CCGTCACCAC
CATCGCCAAC ACCAACAGGC GCGGCACAGC TACAATCCGC CGTTCGCCTC GATCATAGTG
GACGCCAATT CCGGCGCGAC GCTTTCGTCC ACCAATCCCG ACAGCCTTCG TCATCCGGCA
TCGCTTACCA AGATGATGAC GCTCTATCTG CTGTTCGAGC GTCTGGATGC GGGCAAGATC
AATCTCGATA CCGAGATGCG GGTCTCAGGG CACGCGGCGG CGCAGGACCC GACGAAACTC
GGTCTGCGAA GCGGTCAGAC CATCCGCGTC GAAGACGCCA TCAAGGGCCT GGTGACGAAG
TCCGCAAACG ATGCGGCGGT CGTGATCGCC GAGGCGGTCG GCGGAGACGA AGATGACTTC
GCCAGGATGA TGACGCGGAA GGCGCGTGCT CTCGGCATGA CCCGGACGGT CTATCGCAAC
GCCTCGGGTC TTCCCGATGA CGATCAAGTC ACCACCGCGC GGGACCAGGC AACGCTCGGT
CGTGCGCTGC AGGACCGGTT CCCGCGCTAT TACCGCTACT TCGCGACGAC CTCGTTCACA
TTCCGCGGCC GCACCATTCG CGGCCACAAC CATCTGCTCG GCAGTGTCGA CGGCGTCGAC
GGCATCAAGA CCGGGTATAT CCGGTCCTCC GGCTTCAATC TCGTCACCAA TCTGAAGCGC
GGCAATCGTC ACCTGGTCGG CGTCGTCCTC GGAGGCCGCA GCAGCGGTTC GCGCGACGCG
ACCATGCGCA AACTGCTAAC CGACAATCTC GACAAGGCCG CGACGCGGCG GACGGTCGCC
GCCATCACCG AGAGCAGCAC GGCCGACGCC AATGCGCAGG TGGCCGAAGA TCAGGCGCGC
TCACGGCCAA AGGGCATGAA GCAGGTCGAC GGCGCCGTTC AGGTTGCATC TGCACCCGAG
CCGGTCGCGC TGCCGACCGA ACGTCCCGCT CACCTGACCC ACTCGCTGGT AACAGCCTCG
ACCGCCGCGC TGCCACAGAA GCGGCCCAGA CCCGAGCCCG CTCCCCTGAC GAGCGGCGTC
ATCGAAACCC CGCCGATCGA CGCCGTTCCC GGCTCCACCG AACCGATGAA GCCGGTGCGC
GTGAAGACGG TGCAGGTCAG GGCGGGATCG ATCAGGTTGG CCTCGGCCGG GTCGGCGCCG
TCGTTGCCGC CGGTCGCAGG CAACGCCGCC GCGGCCGTTC GCGACGGAGC ACCGGAAACC
TCAGGGTCTG TCGTGGCGCG GGCCAACATG CCACCGCAGC CTGCCAACTT CGGCACCGGC
CAGGGCATCC TTGGCGTGCT GCCGGCCTCC AGCGTCCCCT CCCCGACATC GCAGACAATG
GCGAACGCGG ATTCCGCGCC CAAGGTTCAA CCGCAGGCTG TTCAGCACAA CGGCGCGGTG
AAGCCGGTGG CATCGCATTC GGGCTGGATC ATCCAGGTCG GCGCGCTGGA AACCGAGCGC
GAGGCGCGCG AGCGTCTCGA TGCGGCGCGA GGCCGCGCCC GCGGCATGCT GGGCAAGGCC
GATCCCTTCA CCGAGACCGT CGCCAAAGGC AACAAGAAGC TGTACCGCGC CCGCTTCGCC
GGCCTCGACC GGAGTGAGGC CGAAGCCGTG TGCCGTACCC TGAAGCGTTC GGATATGTCC
TGCATCACGA TCAAAAATTG A
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| Protein sequence | MLRTTLASSR VLRAGAIGLA ALAAVVFTID HADARRARHH HRQHQQARHS YNPPFASIIV
DANSGATLSS TNPDSLRHPA SLTKMMTLYL LFERLDAGKI NLDTEMRVSG HAAAQDPTKL
GLRSGQTIRV EDAIKGLVTK SANDAAVVIA EAVGGDEDDF ARMMTRKARA LGMTRTVYRN
ASGLPDDDQV TTARDQATLG RALQDRFPRY YRYFATTSFT FRGRTIRGHN HLLGSVDGVD
GIKTGYIRSS GFNLVTNLKR GNRHLVGVVL GGRSSGSRDA TMRKLLTDNL DKAATRRTVA
AITESSTADA NAQVAEDQAR SRPKGMKQVD GAVQVASAPE PVALPTERPA HLTHSLVTAS
TAALPQKRPR PEPAPLTSGV IETPPIDAVP GSTEPMKPVR VKTVQVRAGS IRLASAGSAP
SLPPVAGNAA AAVRDGAPET SGSVVARANM PPQPANFGTG QGILGVLPAS SVPSPTSQTM
ANADSAPKVQ PQAVQHNGAV KPVASHSGWI IQVGALETER EARERLDAAR GRARGMLGKA
DPFTETVAKG NKKLYRARFA GLDRSEAEAV CRTLKRSDMS CITIKN
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