Gene Nham_2405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2405 
Symbol 
ID4030618 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand+ 
Start bp2665560 
End bp2666222 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content59% 
IMG OID637970865 
Productputative phage repressor 
Protein accessionYP_577656 
Protein GI92117927 
COG category[K] Transcription 
COG ID[COG2932] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGACG TTGAATGGAT TATTGAGGGG CTAAAGAAGC CGGGCAAAAG CCAGACCGGC 
CTAGCAAAGG CGCTTGGCCG GGCACCCTCG GCCATCACAA GTCTACTCAA GGGAACGCGC 
GAGCTAAAAG CGCGAGAAAT CCCGATCGTG AAAGAATACC TTGAGTCGGC GCCGCCGCCG 
CCAAAACAGA CCAAAATCAT CCACCCCTCC GGTCCGGAAC AGTCCGAAGT CACCAAGGTC 
AGCGAAGGCT GGCCTAATAC CGGGGAACGC ACCGTCAGCG TCCGCGGTGT CGCCGTCGGT 
GGCGACGACG GGTTTTTCTA CTTCGGAGAT GTGATTGATA GGGTGAAACG TCCGCCCGGC 
ATCGCCAACG CAAAGGACGT GGAAGCCCTT AACGTGGCTG GCGAAAGTAT GGCTCCCCGC 
TTCGGACCAG GGGAACTGAT CTACATCCAG CTTCGACCGC CGGCGCCAGG CGATGACATC 
GTGGTCGAGA TCTACCCCGA GAAGGAGGGC GACCAGTCCA AAGGCTTCCT AAAACGGCTG 
GTGAGACGAA CCGGGTTGCG GCTCTACTGC CAGCAGTTCA ACCCGCCGGC CGATATCGAG 
TTTGATATGG GCGAGGTGAA GAACGTCTGG CGCGTGCTGA CGCTGCGGGA TTTGTTGGGG 
TGA
 
Protein sequence
MSDVEWIIEG LKKPGKSQTG LAKALGRAPS AITSLLKGTR ELKAREIPIV KEYLESAPPP 
PKQTKIIHPS GPEQSEVTKV SEGWPNTGER TVSVRGVAVG GDDGFFYFGD VIDRVKRPPG 
IANAKDVEAL NVAGESMAPR FGPGELIYIQ LRPPAPGDDI VVEIYPEKEG DQSKGFLKRL 
VRRTGLRLYC QQFNPPADIE FDMGEVKNVW RVLTLRDLLG