Gene Nham_2391 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2391 
Symbol 
ID4030759 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2653494 
End bp2655110 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content61% 
IMG OID637970851 
Productphage portal protein, lambda 
Protein accessionYP_577642 
Protein GI92117913 
COG category[R] General function prediction only 
COG ID[COG5511] Bacteriophage capsid protein 
TIGRFAM ID[TIGR01539] phage portal protein, lambda family 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACACAC GGACGCGCCG ACGGCGCAAA GGCCCGGAGC CTTCCGCTGG CGCTGTACCG 
GTCCAGCCTC GCGCGCAATA TTTGCGTGGT GACCGCTCCG GAATCTTGCA GATGCGCCGC
GCTATCACGC GCGACGGGAC CGTTAATGTG CGGGAGGCGG CGGCGAGGGC GGCGGCGCTG
GCCTGGGATT TCATGCACAA CTCCGGCTGG CTGGCTGGAG CCGCAACACA GGTCATCACC
GACACGATCG GCACCGAACT GAAACTGAAC TGCCGCCCTA ATCTGTCGCG GCTTGGCTAC
GATGCGCAAG AGCAGTCGGA GTTCTGCCGG TTGGTTGAGG CCGAATGGCA CCGCTACGCG
TGGGAGCCGC GCGAGTGCGA TCTGGCAGGC AAGGCCACGA TTGCTGAAAT GCTCGATGGC
GTGATCCGCT ATTATCTCGC CAGCGGCGAA GCCTTCGGCA TTCTCGACTT TTTGCCGACC
GGCCAACGGA AGCGTTATGG CATCAGGACC GGGACCAAGA TTTCGCTTGT CGCGTCGCAT
CGCTTGAAGC GAGAAACAAA CGAATTCAAC GGGATGGACC AGGGCATTTT TCACGACGCG
ATCGGACGCC CGACCCATTA TCGTTTCTGC CGCCGCGAAA GCGGCATGGA TGTCGACCAC
GATATTCCTG CTTATGACGG TCGCGGCTTG CGCCGCGTGG TGCATGTCAT GGACCGCGGC
GACAACCCCG ACAGCCCGCG CGGCATTTCG CCGATGACGC CGGTGATGAA GGTCGCGGCG
CAATTCGACC AGCTTGCCGA TGCCACACTG GCGACGGCGT TGATGCAGAC AATCTTTGCG
GCGACGATCA AGAGCCCGGA AGCGTCGGCG GCGGCGTTCG AAGCGATCAA CAGCCTTGGC
GAAGATTATG ACGATCTTCG CGGCGACCTG ATGGATGTCT GGGGCCAGCG CCTCTCCGCT
CTGAAAGAGG GTGGTATCTC GATGAACGAT CCGGCGCGGA TCAACCATCT TGGACCAGGC
GAAGAATTTA CAATGCACAC GGCCTCGACG CCAGGGTCGC AGTACCTGCC ATTCTCGCAG
AATCTTCAGC GCGAAATGGC GCGGTGCATC GGCATCACTT ACGAAAGCCT GGCGATGGAC
CATTCCAGCG CCAGTTATTC GAGTGTGAAA ATGTCGATGG CGTCGATCTG GCCGATCGTT
CTACGGCGAC GGGAGCGGAT CGCAGCGCCG TTCTGCCAAG CAATTTATGA AAACTGGCTC
GACGAGATGA TCTGGTCGGG GGCAATCCCG GTCAAAGGCG GATACGCCGC CTATTCCGCC
AATCGCATCG ATGTCGTCGA TACCGAGTGG CGCGGCCCTG AGCGGCCAAG CGCCGACCCG
TACAAAGATG CGCTTTCGAA CAAGATCGAG CTGGAGATGG GCGCGACCAC GATGCAGCGT
ATCTACGCCG CCAAGGGGCT GAATTGGGAG GAAGAAACCG ACCAGATTGC CCGCGAAATG
GACAAGCTGA AGAAAATCGA GATGCCAGCT CCCTTTGGCA GGAGCCAGGG TGGCGGCGCG
GGCCCCAATG GCGCGGCCGC CGAAGGTTTG CGCGAGCCGG CGAAGGTAGT CGAGTGA
 
Protein sequence
MNTRTRRRRK GPEPSAGAVP VQPRAQYLRG DRSGILQMRR AITRDGTVNV REAAARAAAL 
AWDFMHNSGW LAGAATQVIT DTIGTELKLN CRPNLSRLGY DAQEQSEFCR LVEAEWHRYA
WEPRECDLAG KATIAEMLDG VIRYYLASGE AFGILDFLPT GQRKRYGIRT GTKISLVASH
RLKRETNEFN GMDQGIFHDA IGRPTHYRFC RRESGMDVDH DIPAYDGRGL RRVVHVMDRG
DNPDSPRGIS PMTPVMKVAA QFDQLADATL ATALMQTIFA ATIKSPEASA AAFEAINSLG
EDYDDLRGDL MDVWGQRLSA LKEGGISMND PARINHLGPG EEFTMHTAST PGSQYLPFSQ
NLQREMARCI GITYESLAMD HSSASYSSVK MSMASIWPIV LRRRERIAAP FCQAIYENWL
DEMIWSGAIP VKGGYAAYSA NRIDVVDTEW RGPERPSADP YKDALSNKIE LEMGATTMQR
IYAAKGLNWE EETDQIAREM DKLKKIEMPA PFGRSQGGGA GPNGAAAEGL REPAKVVE