Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2391 |
Symbol | |
ID | 4030759 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2653494 |
End bp | 2655110 |
Gene Length | 1617 bp |
Protein Length | 538 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637970851 |
Product | phage portal protein, lambda |
Protein accession | YP_577642 |
Protein GI | 92117913 |
COG category | [R] General function prediction only |
COG ID | [COG5511] Bacteriophage capsid protein |
TIGRFAM ID | [TIGR01539] phage portal protein, lambda family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAACACAC GGACGCGCCG ACGGCGCAAA GGCCCGGAGC CTTCCGCTGG CGCTGTACCG GTCCAGCCTC GCGCGCAATA TTTGCGTGGT GACCGCTCCG GAATCTTGCA GATGCGCCGC GCTATCACGC GCGACGGGAC CGTTAATGTG CGGGAGGCGG CGGCGAGGGC GGCGGCGCTG GCCTGGGATT TCATGCACAA CTCCGGCTGG CTGGCTGGAG CCGCAACACA GGTCATCACC GACACGATCG GCACCGAACT GAAACTGAAC TGCCGCCCTA ATCTGTCGCG GCTTGGCTAC GATGCGCAAG AGCAGTCGGA GTTCTGCCGG TTGGTTGAGG CCGAATGGCA CCGCTACGCG TGGGAGCCGC GCGAGTGCGA TCTGGCAGGC AAGGCCACGA TTGCTGAAAT GCTCGATGGC GTGATCCGCT ATTATCTCGC CAGCGGCGAA GCCTTCGGCA TTCTCGACTT TTTGCCGACC GGCCAACGGA AGCGTTATGG CATCAGGACC GGGACCAAGA TTTCGCTTGT CGCGTCGCAT CGCTTGAAGC GAGAAACAAA CGAATTCAAC GGGATGGACC AGGGCATTTT TCACGACGCG ATCGGACGCC CGACCCATTA TCGTTTCTGC CGCCGCGAAA GCGGCATGGA TGTCGACCAC GATATTCCTG CTTATGACGG TCGCGGCTTG CGCCGCGTGG TGCATGTCAT GGACCGCGGC GACAACCCCG ACAGCCCGCG CGGCATTTCG CCGATGACGC CGGTGATGAA GGTCGCGGCG CAATTCGACC AGCTTGCCGA TGCCACACTG GCGACGGCGT TGATGCAGAC AATCTTTGCG GCGACGATCA AGAGCCCGGA AGCGTCGGCG GCGGCGTTCG AAGCGATCAA CAGCCTTGGC GAAGATTATG ACGATCTTCG CGGCGACCTG ATGGATGTCT GGGGCCAGCG CCTCTCCGCT CTGAAAGAGG GTGGTATCTC GATGAACGAT CCGGCGCGGA TCAACCATCT TGGACCAGGC GAAGAATTTA CAATGCACAC GGCCTCGACG CCAGGGTCGC AGTACCTGCC ATTCTCGCAG AATCTTCAGC GCGAAATGGC GCGGTGCATC GGCATCACTT ACGAAAGCCT GGCGATGGAC CATTCCAGCG CCAGTTATTC GAGTGTGAAA ATGTCGATGG CGTCGATCTG GCCGATCGTT CTACGGCGAC GGGAGCGGAT CGCAGCGCCG TTCTGCCAAG CAATTTATGA AAACTGGCTC GACGAGATGA TCTGGTCGGG GGCAATCCCG GTCAAAGGCG GATACGCCGC CTATTCCGCC AATCGCATCG ATGTCGTCGA TACCGAGTGG CGCGGCCCTG AGCGGCCAAG CGCCGACCCG TACAAAGATG CGCTTTCGAA CAAGATCGAG CTGGAGATGG GCGCGACCAC GATGCAGCGT ATCTACGCCG CCAAGGGGCT GAATTGGGAG GAAGAAACCG ACCAGATTGC CCGCGAAATG GACAAGCTGA AGAAAATCGA GATGCCAGCT CCCTTTGGCA GGAGCCAGGG TGGCGGCGCG GGCCCCAATG GCGCGGCCGC CGAAGGTTTG CGCGAGCCGG CGAAGGTAGT CGAGTGA
|
Protein sequence | MNTRTRRRRK GPEPSAGAVP VQPRAQYLRG DRSGILQMRR AITRDGTVNV REAAARAAAL AWDFMHNSGW LAGAATQVIT DTIGTELKLN CRPNLSRLGY DAQEQSEFCR LVEAEWHRYA WEPRECDLAG KATIAEMLDG VIRYYLASGE AFGILDFLPT GQRKRYGIRT GTKISLVASH RLKRETNEFN GMDQGIFHDA IGRPTHYRFC RRESGMDVDH DIPAYDGRGL RRVVHVMDRG DNPDSPRGIS PMTPVMKVAA QFDQLADATL ATALMQTIFA ATIKSPEASA AAFEAINSLG EDYDDLRGDL MDVWGQRLSA LKEGGISMND PARINHLGPG EEFTMHTAST PGSQYLPFSQ NLQREMARCI GITYESLAMD HSSASYSSVK MSMASIWPIV LRRRERIAAP FCQAIYENWL DEMIWSGAIP VKGGYAAYSA NRIDVVDTEW RGPERPSADP YKDALSNKIE LEMGATTMQR IYAAKGLNWE EETDQIAREM DKLKKIEMPA PFGRSQGGGA GPNGAAAEGL REPAKVVE
|
| |