Gene Nham_2354 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2354 
Symbol 
ID4032024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2621691 
End bp2622650 
Gene Length960 bp 
Protein Length319 aa 
Translation table11 
GC content68% 
IMG OID637970815 
Productmalonyl CoA-acyl carrier protein transacylase 
Protein accessionYP_577606 
Protein GI92117877 
COG category[I] Lipid transport and metabolism 
COG ID[COG0331] (acyl-carrier-protein) S-malonyltransferase 
TIGRFAM ID[TIGR00128] malonyl CoA-acyl carrier protein transacylase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.603895 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCGG CATTTACCTT TCCTGGGCAG GGTTCCCAGA CCGTCGGTAT GGGCAAGGCA 
CTGGCGGACG CTTTTCCGGT CGCGAAAGCC GTTTTCGACG AGGTGGATGC CGCTCTCGGC
GAGAAACTGA CCGCCATTAT CTGGGGCGGT CCCGCTGAAA CCCTGCAACT GACGGAGAAT
GCCCAGCCGG CATTGATGGC GGTCTCCATC GCCACGCTCC GCGTGCTCGA GGTCGAGGCC
GGATTCTCCG TGGCCCGTGA TGCCGCCTTC GTGGCCGGGC ATTCGCTCGG GGAATACTCC
GCGCTGGCGG CCGCGGGAAG CCTGAGCATC GCCGATACGG CGCGGCTGCT ACGGACACGC
GGCCTCGCCA TGCAGAAGGC GGTACCGGTC GGCGTCGGCG CGATGGCGGC GCTGCTGGGT
CTGGATTACG AGACCGCGGT GGCGGTTGCC GACGAAGCCG CGCAGGGTCA AGTCTGCCAG
GCCGCGAACG ACAATGGCGG CGGGCAGGTG GTCGTGTCGG GCGACAAGGC GGCGGTCGAT
CGTGCGGTCG AGATCGCAAA GACCCGGGGC GCCAGGCGTG CGATGCTGCT GCCGGTGTCG
GCGCCGTTTC ATTGCAAGCT GATGCAACCG GCCGCCGACG CGATGGCCAA GGCGCTGGCT
AACGTGACGA TCAATACGCC GGCCGCGCCG GTCGTATCCA ATGTGCTGGC CGCGCCGATC
ACGGACCCGG ACGAGATCCG CCGCCGCCTG ATCGAGCAGG TCACAGGGAC CGTACGCTGG
CGAGAGTCGG TGGCCTACAT GGCGGGACAT GGCGTGACGC GCTTTTTCGA GATCGGAGCC
GGCAAGGTCC TGAGCGGGCT GGTCAAGCGC ATTGCGGATG GCGCTATTGG CGTCGCCGTC
GGCGGACCGA ACGACATCGC GCCGGCCAGG GAAGCGCTGG CTGCCGCGCA ACCGGCGTAA
 
Protein sequence
MTAAFTFPGQ GSQTVGMGKA LADAFPVAKA VFDEVDAALG EKLTAIIWGG PAETLQLTEN 
AQPALMAVSI ATLRVLEVEA GFSVARDAAF VAGHSLGEYS ALAAAGSLSI ADTARLLRTR
GLAMQKAVPV GVGAMAALLG LDYETAVAVA DEAAQGQVCQ AANDNGGGQV VVSGDKAAVD
RAVEIAKTRG ARRAMLLPVS APFHCKLMQP AADAMAKALA NVTINTPAAP VVSNVLAAPI
TDPDEIRRRL IEQVTGTVRW RESVAYMAGH GVTRFFEIGA GKVLSGLVKR IADGAIGVAV
GGPNDIAPAR EALAAAQPA