| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2351 |
|---|
| Symbol | |
|---|
| ID | 4032021 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrobacter hamburgensis X14 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007964 |
|---|
| Strand | - |
|---|
| Start bp | 2619061 |
|---|
| End bp | 2620326 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637970812 |
|---|
| Product | 3-oxoacyl-(acyl carrier protein) synthase II |
|---|
| Protein accession | YP_577603 |
|---|
| Protein GI | 92117874 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0304] 3-oxoacyl-(acyl-carrier-protein) synthase |
|---|
| TIGRFAM ID | [TIGR03150] beta-ketoacyl-acyl-carrier-protein synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGCG TCGTCGTCAC AGGTATCGGC ATGGTGTCGC CGCTTGGCTG CGGCGTCGAG
CCGACCTGGA AACGCATCCT CGCCGGCGAG AGCGGCGCGA AGCAGATCGA GACGTTCGAC
GTTGCCGATT TGCCGAGCCG AATCGCCTGC GTCGTTCCGC GCGGCGACGG GACCGACGGA
ACCTTCAATC CCGACCAGTG GATGGAGCCG AAGGACCAGC GCAAGGTCGA CGATTTCATC
ATCTTCGCGA TGTGCGCCGC CACGCAGGCG CTCGACGATG CGAACTGGCA TCCGGCAACC
GAGGAGGATC GTTGCGCGAC CGGGACCATG ATCGGTTCCG GCATCGGCGG CCTGTCGGGA
ATCGCAGACA CCGCGGTTCT TATGAAGGAG CGGGGAGCGC GCAAGGTGTC GCCGTTCTTC
ATTCCGGGAC GCCTGATTAA TCTCGCTTCG GGTTACGTGT CGATCGAGCA CGGATTGAAG
GGGCCGAACC ATGCCGTGGT CACGGCCTGT TCGACCGGTG CTCATGCCAT CGGCGATGCC
AGCCGCCTGA TCGCGCTCGG CGACGCCGAT GTGATGGTGG CGGGCGGCGC GGAGTCGCCG
ATCTGCCGTA TCGGCATGGC GGGCTTCTGC GCGGCGCGCG CGCTGTCCAC CGGATTCAAC
GACACGCCGC AGAAAGCCTC GCGTCCCTAC GACAAGAGTC GCGACGGCTT CGTGATGGGA
GAGGGCGCGG GTATCGTTGT GCTTGAGGAG TACGAGCATG CACGCCAGCG CGGCGCGAGA
ATCTACGCCG AGGTGACAGG CTATGGCCTG TCGGGGGATG CCTATCACAT CACCTCGCCG
TCGCCGGACG GCGATGGCGC ATTTCGAAGC ATGACCGCGG CGATGAAGCG CGCAGGCGTA
TCGCCGTCGG ACCTCGACTA TATCAACGCC CACGGCACAT CCACTCAGGT CGGCGATGAA
ATCGAACTGG GCGCAGTCGA GCGCCTGCTT GGTAACGCCG CATCGAGGAC GTCGATGTCG
TCAACCAAAT CGTCGATCGG CCATCTGCTG GGCGCCGCCG GCGCTGTCGA AGCGATTTTC
AGTATCCTTG CGATTCGCGA CAACATCGCG CCGCCGACGA TCAACCTTGA TGATCCCTCC
GTGGAAACCG CGATCGATCT CGTCCCGCAC AAGGCACGGA ACCGGGAGAT CAATGTGGTG
CTGTCGAATT CGTTCGGTTT CGGCGGCACC AACGCGTCCG TTGTCATGCG GCGTGTGGCC
GATTAA
|
|---|
| Protein sequence | MRRVVVTGIG MVSPLGCGVE PTWKRILAGE SGAKQIETFD VADLPSRIAC VVPRGDGTDG
TFNPDQWMEP KDQRKVDDFI IFAMCAATQA LDDANWHPAT EEDRCATGTM IGSGIGGLSG
IADTAVLMKE RGARKVSPFF IPGRLINLAS GYVSIEHGLK GPNHAVVTAC STGAHAIGDA
SRLIALGDAD VMVAGGAESP ICRIGMAGFC AARALSTGFN DTPQKASRPY DKSRDGFVMG
EGAGIVVLEE YEHARQRGAR IYAEVTGYGL SGDAYHITSP SPDGDGAFRS MTAAMKRAGV
SPSDLDYINA HGTSTQVGDE IELGAVERLL GNAASRTSMS STKSSIGHLL GAAGAVEAIF
SILAIRDNIA PPTINLDDPS VETAIDLVPH KARNREINVV LSNSFGFGGT NASVVMRRVA
D
|
|---|
| |