Gene Nham_2342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2342 
Symbol 
ID4032012 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2607888 
End bp2610383 
Gene Length2496 bp 
Protein Length831 aa 
Translation table11 
GC content61% 
IMG OID637970803 
Productorganic solvent tolerance protein 
Protein accessionYP_577594 
Protein GI92117865 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1452] Organic solvent tolerance protein OstA 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGCCGGAA TCGCCGCCCT CCGTAGACGC TCGACTGCTT GCGAGCGGCG CACCTCCCTG 
CGCCGCCGTC GAATCGGCAC GTCCGCGATT CTGCCCATGC TGGCCACCAC TGCTCTCGGT
CTGATCATCG CCGTCGCGCT GGACATCGTC ACGATCACGC CGGCCGCGGC CCAAAGCTTC
ACCTACAACC CTCGCCCGGC AAAGCCCAAG CCGGCACCGG CTCACAACGA TGGGCAGATG
CTCGTTCAGG CCAACGAGGT CGACTACGAT TACAACAACT CGCGCGTCTC GGCCGTTGGC
AACGTGCAGC TGTTCTACAA CGGAACCGGC GTCGAGGCGG ACAAGGTCAT CTACGACCAG
AAAACCAAGC GGCTCCACGC CGAGGGCAAC ATCCGCATGA CCGATGCGGA CGGCAAGATC
ACCTACGCCA ACATCCTGGA TTTAAGCGAC GACTACCGGG ACGGCTTTGT CGATTCGCTA
AGGGTCGACA CCGCGGACGC GACGCGCATG GCGGCAAGCC GGGCCGATCG GACCGAGGGC
AACTACACCG TCTTCGAGAA CGGCGTCTAT ACCGCCTGCG CGCCTTGCAA GGACGATCCG
AAAAAGCCTC CGCTTTGGCA GGTCAAGGGC GCCCGCATCA TTCACGATCA GACCGAGAAG
ATGCTGTACT TCGAGGACGC CCGGCTGGAA TTCTTCGGCG TGCCGATGGC CTATATGCCC
TTCTTCTCCA CGCCGGATCC GACCGTGAAG CGCAAGAGCG GCTTCCTGAT GCCGTCTGTA
ACTTCGTATA ACCCCTTTGG GGTCGGGATC GAGGTCCCCT ATTATTTCGC GCTCGCGCCG
GACTACGATC TGACCCTCTC GCCGCGTTTC ACCACGCGGC AGGGCGTGCT GATGCAGGGC
GAGTTCCGGC AACGTCTCAT CGACGGCGCC TATCAAATCC GTGCTTATGG AATCAACCAA
CTCGATCAGA ACGCCTTTGC CGGGCAGCCC GGCGATCGCG CGTTCCGCGG CGGTGTCGAT
ACCAAGGGCC AGTTTGCGTT GAACGACAAG TGGGTCTGGG GCTGGGACGG CGTCCTGGTG
AGCGACTACT ATTTCTTCTC CGACTACCGG TTAAAGCAGT ACCGGGATCC CCTGCAATCG
TTCCTGACCC TGCCGACCGA AGCGATCTCG CAACTCTATC TGTCCGGCGT CGGCAACCGT
AGCTATTTCG ATGCCCGCGC GATCCACTAT CTGAGCTTCT CAGGCAACCA AAGTCAGGTT
CCGGTTGTTG CGCCGGTCAT CGACTATTCG AACGTCATCA ACCATTCGGT CATCGGCGGC
GAGTTCAGCT ATAAGTTCAA CTTCACCAAC CTTACGCGCG ATCAGGCGCA GTTCGACCCG
ATCTCGACGC TGGGGAACAC ATCGTTCGCG TGCGCCCCAA CGTCGGCAGA CTCAGCTTTG
AGAGTGCCGG CCAATTGTCT GCTTCGAGGC ATCCCGGGAA CGTATACGCG CCTGACCGCC
GAAGCACAGT GGCGCAAGTC GTTCACCGAT TCCTTCGGCC AGATCTGGAC GCCGTTCGCC
TCGCTCCGTG CCGACGCGAT CAAGGCCGAC ATCTCGAACC AGCCGGGCGT CGACAAGTTC
ATCCAGCCCG GTAACACGAG CACGGTCCGC CTGATGCCGG CGGTGGGCCT CGAGTATCGC
TACCCCTTCA TCAACGTTCA GCCCTGGGGC ACCACGACGA TCGAACCGAT CGCGCAGGTC
ATCATCCGCC CGAACGAGAG TTATGCGGGC AAGCTGCCGA ACGAGGACGC GCAAAGCCTG
GTATTTGACG CCAGCAACCT CTTCAGCGTC GACAAATTCT CCGGATACGA CCGCGTCGAA
GGCGGCGGCC GCGCCAATGT CGGCGTGCAG GCGACGACCC AATTCGACCG CGGCGGCTCG
ATCAATTTCC TGTTCGGCCA GTCCTATCAT CTGTTCGGCC TGAACTCGTT CGCAGTCGCT
GATATCGCCA ATACGGGCGT TGATTCCGGC TTGCAGCGCG CGCAATCTGA CTATGTGTCG
AGCATCAACT ATTCACCCAA CAGCATCTTC ACATTCAGCA CGCGCGCGCG TTTCGATGAA
GCGACCTTGA ACGTACAGCG CTTCGAGGCC GAAGGCCGCG CCAGCTTCAA CCGCTGGTCT
GCGAGCGTCC TGTACGGCGA TTATGCCGCG CAGCCGGACC TCGGATATCT TACGCGCCGC
CGGGGCATTC TGGGTACCGG CTCCATCAAG GTTGCATCGA ATTGGGTCGT GCAGGGTGCG
GCACGCTGGG ATCTGGAAGC CCACCAGATC AACCAGTATA CAATCGGCGC AGGGTACGTG
GACGACTGTT TCGTTCTCGG CCTCAATTAC GTGACGTCAT ACACCTACTC TGCAGGAACG
ACGCCGCCCA CGCTAAATCA TGCTTTCATG CTTCAGCTTG GCCTGCGGAC CCTGGGCCAG
ACCCGTGGAG GGTCGAGCGG CGCCGGCATC CGGTAA
 
Protein sequence
MAGIAALRRR STACERRTSL RRRRIGTSAI LPMLATTALG LIIAVALDIV TITPAAAQSF 
TYNPRPAKPK PAPAHNDGQM LVQANEVDYD YNNSRVSAVG NVQLFYNGTG VEADKVIYDQ
KTKRLHAEGN IRMTDADGKI TYANILDLSD DYRDGFVDSL RVDTADATRM AASRADRTEG
NYTVFENGVY TACAPCKDDP KKPPLWQVKG ARIIHDQTEK MLYFEDARLE FFGVPMAYMP
FFSTPDPTVK RKSGFLMPSV TSYNPFGVGI EVPYYFALAP DYDLTLSPRF TTRQGVLMQG
EFRQRLIDGA YQIRAYGINQ LDQNAFAGQP GDRAFRGGVD TKGQFALNDK WVWGWDGVLV
SDYYFFSDYR LKQYRDPLQS FLTLPTEAIS QLYLSGVGNR SYFDARAIHY LSFSGNQSQV
PVVAPVIDYS NVINHSVIGG EFSYKFNFTN LTRDQAQFDP ISTLGNTSFA CAPTSADSAL
RVPANCLLRG IPGTYTRLTA EAQWRKSFTD SFGQIWTPFA SLRADAIKAD ISNQPGVDKF
IQPGNTSTVR LMPAVGLEYR YPFINVQPWG TTTIEPIAQV IIRPNESYAG KLPNEDAQSL
VFDASNLFSV DKFSGYDRVE GGGRANVGVQ ATTQFDRGGS INFLFGQSYH LFGLNSFAVA
DIANTGVDSG LQRAQSDYVS SINYSPNSIF TFSTRARFDE ATLNVQRFEA EGRASFNRWS
ASVLYGDYAA QPDLGYLTRR RGILGTGSIK VASNWVVQGA ARWDLEAHQI NQYTIGAGYV
DDCFVLGLNY VTSYTYSAGT TPPTLNHAFM LQLGLRTLGQ TRGGSSGAGI R