Gene Nham_2336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2336 
Symbol 
ID4033335 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2600575 
End bp2602452 
Gene Length1878 bp 
Protein Length625 aa 
Translation table11 
GC content64% 
IMG OID637970797 
ProductABC transporter related 
Protein accessionYP_577588 
Protein GI92117859 
COG category[R] General function prediction only 
COG ID[COG0488] ATPase components of ABC transporters with duplicated ATPase domains 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.590481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTATCCA TCACCGATAT TTCGATCCGC ATCGCCGGAC GGCTACTGAT CGACCATAGC 
TCCGTACAGA TCGTGCCCGG CGCGCGCGTC GGCTTTGTCG GCCGCAACGG CGTCGGTAAA
TCGACGCTGT TCCATGCGAT CCGCGGTGAA CTCCCGACGG AAACGGGCAC CATCGCCATC
CCGCCGCGCT GGCGCGTCGG CAGCCTTGCA CAGGAAGCTC CCGACGGCCC CGAGAGCCTG
GTCGAGGTGG TGCTCAAAGC CGACCTCGAA CGCCACGCGC TGCTATGCGA AGCCGAAACG
GCCCACGACC CGCACCGCAT CGCGGAAATC CAGACGCGTC TGGTCGATAT CGATGCCCAT
TCCGCTCCGG CGCGTGCGGC GTCGATCCTG AGCGGCCTCG GATTCTCGGC CGCAGATCAG
GCCCGCCCCT GTTCGGAATT CTCAGGCGGC TGGCGCATGC GCGTTGCGCT CGCGGCGACC
CTCTTTGCCG CACCCGATCT GCTGCTGCTC GACGAGCCGA CCAACTACCT CGACCTCGAA
GGCACGCTCT GGCTGGAGGA TCACCTCGCG ACCTATCCGC GCACGGTCAT CGTCATCAGT
CATGACCGCG ATCTGCTCGA CACATCCGTC GATCAGATTC TGCACCTCGA TCGCGGCAAG
CTGTCGCTCT ACAAGGGCGC CTATTCCTCC TTCGAAGACC AGCGCGCCAC CCGCGAGATG
CTCGACGCCA AGCACGCCAG GCGGCAGGCC GATGAACGCA AGCGGCTCCA GGACTTCGTC
GATCGCTTCA AGGCCAAGGC CTCGAAGGCG CGCCAGGCGC AGTCACGCGT GAAGATGCTC
GAACGCATGA AGCCCGTGAC CGCGCTGGTC ACGCAGGACG TGCGTGAGAT TTCTTTCCCC
GTGCCTGAAA AGCTGCTGTC GCCGCCGATC ATCGCCGTTG ACGAGGCGGT CGTGGGTTAC
GACCCCGACC TGCCGGTGCT CAAAGGCGTG ACCTTGCGGA TCGACGAAGA CGACCGCATC
GCCTTGCTCG GTGCCAACGG CAACGGCAAG TCCACCCTCG TCAAACTGCT TGCCGGAAAG
CTGCAACCGT TTGCGGGCAA GGTGGTGCGC GCCGACAAAT TGTCGATCGG CTATTTCGCC
CAGCATCAGA CCGATGAACT GGACCTCGAC GGCTCGCCCT ACGATCATGT GCGCCGGTTG
ATGCTGGGTG CGCCGGAAAC GAAAATTCGC GCCCGCGTCG GCGCCATCGG CTTTTCCGGC
AAGGCGGGCG ACACCCTCGT GAGAAGCCTG TCGGGCGGCG AAAAAGCGCG TCTTCTGCTC
GGGCTTGCGA CATTCTACGC GCCGAACATG ATCATTCTCG ACGAGCCGAC CAACCATCTC
GATATCGACA GCCGCGCCGT GCTTGCCGAA GCCATCAACG AATTTCCGGG CGCTGTCATC
ATGGTCTCGC ACGATCGCTA CCTGATCGAA GCCTGCGCCG ACCAGCTATG GGTGGTCGCG
GACCGGACCG TCACACCTTA CGATGGCGAC CTCGACGATT ATCGCCGCGC GGTTCTGTCG
GCGCGCGGCC TGCGCACAAG CGCCCGCGAT CGTGGATCCA GTGAACGCGA CAACGGCCGC
GACAAGCCTC AACGCACCAA GACGGAAAAG CGTGTGCCGC TGAAGCAGAA GATCGCGAAC
GCCGAGGCGG AGATCGAGCG AATCACGGGT ATCATCGCAA AAATCGATGT CGCCCTCGCC
TTGCCGGATC TGTTCAAGCG CGATCCCAAA CAGGCCGCGC AACTCAGCAA GGCGCGCGCC
AGCGCCGCGA ACGCCCTGCA AAGCGCCGAA GAAAGATGGC TGGAGGCCAG CGCGTCATAC
GAAGAAGCAC CAGGCTAA
 
Protein sequence
MLSITDISIR IAGRLLIDHS SVQIVPGARV GFVGRNGVGK STLFHAIRGE LPTETGTIAI 
PPRWRVGSLA QEAPDGPESL VEVVLKADLE RHALLCEAET AHDPHRIAEI QTRLVDIDAH
SAPARAASIL SGLGFSAADQ ARPCSEFSGG WRMRVALAAT LFAAPDLLLL DEPTNYLDLE
GTLWLEDHLA TYPRTVIVIS HDRDLLDTSV DQILHLDRGK LSLYKGAYSS FEDQRATREM
LDAKHARRQA DERKRLQDFV DRFKAKASKA RQAQSRVKML ERMKPVTALV TQDVREISFP
VPEKLLSPPI IAVDEAVVGY DPDLPVLKGV TLRIDEDDRI ALLGANGNGK STLVKLLAGK
LQPFAGKVVR ADKLSIGYFA QHQTDELDLD GSPYDHVRRL MLGAPETKIR ARVGAIGFSG
KAGDTLVRSL SGGEKARLLL GLATFYAPNM IILDEPTNHL DIDSRAVLAE AINEFPGAVI
MVSHDRYLIE ACADQLWVVA DRTVTPYDGD LDDYRRAVLS ARGLRTSARD RGSSERDNGR
DKPQRTKTEK RVPLKQKIAN AEAEIERITG IIAKIDVALA LPDLFKRDPK QAAQLSKARA
SAANALQSAE ERWLEASASY EEAPG