Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2322 |
Symbol | |
ID | 4033321 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | + |
Start bp | 2581850 |
End bp | 2582914 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637970783 |
Product | diguanylate cyclase |
Protein accession | YP_577574 |
Protein GI | 92117845 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTGAGT TGGACGAACA TGAACGCACA ATGGCGTTCG CGGAGGTGGC GCTCGGCCAG ATCCGATCGC TGCGGCAGAC CGCGATTCCG CGCAACTACG AGATCTGGTA CGTCTACGCC GCCGGATACA ACTGCTCCCT CAACAGGGCT ATCAACGAGA CCCTGGCGCG CAACGGCAAG CTGACCGAAT CCGATCTCGA ACAGATCTAC GAAACCTACC TCTCCCCGAT CAGGACCACC GACCGCATCG ACAAACTCGG CGCGCGCGTC ATCAACGAGA TCGACGACGT GATGACCCTC ATCACCGATC TGCTCGGCAT GACGGCCAGT TTCGGCGACA GCCTGAAGGG AGCAACGGAG AACCTCAGCG CGGCCGATAA CCGCGAACAG GTCAAGGCGG TCGTCGGGGC GCTGATGACA TCGACCCGCG AGATGCAGGA GACCAACAAG GCGCTGGAGG ATCGGCTGGC GATCTCGAAA GTCGAGATCA ACAATCTGCA GCATAGCCTT GAGGCGATCA GGGCCGAGAG CATGACCGAT CCGCTCACCG GCCTCGGCAA TCGCAAATAT TTCGACCGCG CCGTCGAGGA TGCCGTGGCG CTGGCGATCG GCGAAGGCGG GCCGCTGTCG CTTCTGTTGT TCGACATCGA CCACTTCAAG TCGTTCAACG ACAACTACGG CCATTTGACC GGCGATCAGG TGCTGCGGCT GGTGGCGATG TCGCTGAAGC AGACCATCAA GGGCCAGGAC ATCACCGCGC GCTACGGCGG CGAAGAATTC GCGGTCGTGC TGCCCAATAC CGCGCTAAGC CAGGCGCTGA CGGTCGCCGA CCACATCCGC CGCGCCGTGA TGGCCAAGGA ACTGAAGAAA AAGTCGACCG GTGAAATCCT CGGCCGCGTC ACCATCTCGG TCGGCGTCTC GTTGCTTCGC CACGGCGATA CCCCGGACTC GCTGATCGAG CGCGCCGATT CCTGTCTCTA TGCCGCCAAG CGCAACGGTC GCAATCGGGT CATTTGCGAA GCCGATCCGG AATGTTCCAC CGACTTCCAG ACGCGCGTGG CCTGA
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Protein sequence | MVELDEHERT MAFAEVALGQ IRSLRQTAIP RNYEIWYVYA AGYNCSLNRA INETLARNGK LTESDLEQIY ETYLSPIRTT DRIDKLGARV INEIDDVMTL ITDLLGMTAS FGDSLKGATE NLSAADNREQ VKAVVGALMT STREMQETNK ALEDRLAISK VEINNLQHSL EAIRAESMTD PLTGLGNRKY FDRAVEDAVA LAIGEGGPLS LLLFDIDHFK SFNDNYGHLT GDQVLRLVAM SLKQTIKGQD ITARYGGEEF AVVLPNTALS QALTVADHIR RAVMAKELKK KSTGEILGRV TISVGVSLLR HGDTPDSLIE RADSCLYAAK RNGRNRVICE ADPECSTDFQ TRVA
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