| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Nham_2312 |
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| Symbol | |
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| ID | 4029684 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrobacter hamburgensis X14 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007964 |
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| Strand | + |
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| Start bp | 2569393 |
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| End bp | 2571198 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637970773 |
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| Product | Poly(R)-hydroxyalkanoic acid synthase, class I |
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| Protein accession | YP_577564 |
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| Protein GI | 92117835 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG3243] Poly(3-hydroxyalkanoate) synthetase |
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| TIGRFAM ID | [TIGR01838] poly(R)-hydroxyalkanoic acid synthase, class I |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0423881 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGT TACCCGTCGG GACCAAGCGC GCGGCCCGGT TCGATCCCGA TACCTTCGCG
ATGAATCTCG CGAACGCGAT GGAGAGCGGC GGCAGGGCGC TGGCCGCCTA CCTCAAAGCG
CGTGAGAACG ACGAGGCGCG CGACAACCCG CCGAACGAGT TCGCCGAGTT GATCAAGACC
GTCAGCACGG TCGCCGAATA CTGGCTGTCG GACCAGACCC GCGCAGTCGA ATTGCAAACG
AAGCTCGGCA AGGCCTACCT CGACCTCTGG GGCTACGCCG CGCGTCGCCT CTCCGGCGAG
GAGATCGAGC CCGCCATTGA ACCGGCCCCC CGCGACAAAC GTTTCACCGA TCCGGAATGG
CGGTCGAACC AGTTCTTCGA TTTTGTGATG CAGGCGTATC TGCTGACGAC CAAATGGGCG
AACGAGCTGG TGCGCGACGC CGACGGCCTC GATCCGCACA CCCGCAAGAA GGCCGAGTTC
TATGTCGCGC AACTCACCAA CGCGATGGCG CCGTCGAATT TCGTGATGAC CAATCCGGAG
GTGCTGCGCG AAACCTTCGC CCAGAACGCC GACAATCTCG CGCGCGGCAT GAAGATGCTG
GCGGAGGACA TCGAGGCCGG CAACGGCGTG CTGCGCATCC GCCAGTCCGA CTCCGGCAAT
CTCGTGGTCG GCGTCAACAT GGCGACGACG CCCGGCAAGG TGATCTACCA GAACGAGCTG
ATGCAACTGA TCCAGTATTC GCCGGCCACC GGGACGGTGC TGCGGACGCC GCTGCTGATC
GTGCCGCCGT GGATCAACAA GTTCTACATC CTCGATCTCA GGCCGGAGAA ATCCTACATC
AAGTGGTGCG TCGATCAGGG CATCACGGTG TTTGTGATCT CCTGGGTCAA TCCCGACGGG
CGGCTCGGGG AAAAAACCTT CGAGGACTAC ATGAAGGAAG GTCCGCTGGC CGCGATCGAC
GCGATCGAGA AGGCGACCGG CGAGACCAAG GTGCATACCG CCGGCTATTG CGTCGGCGGC
ACCCTGCTCG CGACCACGCT GGCATGGCTT GCTGACAAGC GGCGGGCGCG CGTGACATCG
GCGACGTTCT TCGCCGCGCA GGTCGATTTC ACCCACGCCG GCGATCTGCT GGTCTTCGTG
GACGAGGACC AGATTTCCGC GCTCGAACGC GACATGCAGC AGTCCGGCGT GCTGGAAGGC
AGCAAGATGG CGATGGCCTT CAACATGCTG CGCTCCAACG ACCTGATATG GTCCTATGTC
GTCAGCAACT ATCTCAAGGG CAAGACGCCG CCCGCCTTCG ATCTTTTGCA CTGGAATTCG
GATGCGACGC GGATGCCCGC GGCCAACCAT TCCTATTACC TGCGCAACTG CTACCTCGAG
AACCGCCTCT CCACCGGCTC GATGGTACTC GACAACACCC TGCTCGACCT CTCGAAGGTC
AAGGTGCCGA TCTACAATCT CGCCACCCGC GATGATCACA TCGCGCCGGC GGAATCGGTG
CTGTACGGCT CGCGGTTCTT CGGTGGCCCG GTACGCTACG TGCTGTCCGG ATCCGGGCAC
ATCGCCGGCG TGATCAATCC GCCGCCACTC GGCAAATACC AGTACTGGAC CAACGACGCC
ATCGGCGACA CCACGCTTGC CGAGTGGATG AAGGGCGCGC AGGAACATAA GGGTTCGTGG
TGGCCGGACT GGCACGCATG GCTGCGAAAC ATCGACGCCG AGGAAGTCGC TGCCCGCGAG
GTCGGCAGCG TCGCGCTGCC GCCGATCGAG GACGCGCCGG GCAGCTATGT CCGCGTGCGC
GCCTGA
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| Protein sequence | MSELPVGTKR AARFDPDTFA MNLANAMESG GRALAAYLKA RENDEARDNP PNEFAELIKT
VSTVAEYWLS DQTRAVELQT KLGKAYLDLW GYAARRLSGE EIEPAIEPAP RDKRFTDPEW
RSNQFFDFVM QAYLLTTKWA NELVRDADGL DPHTRKKAEF YVAQLTNAMA PSNFVMTNPE
VLRETFAQNA DNLARGMKML AEDIEAGNGV LRIRQSDSGN LVVGVNMATT PGKVIYQNEL
MQLIQYSPAT GTVLRTPLLI VPPWINKFYI LDLRPEKSYI KWCVDQGITV FVISWVNPDG
RLGEKTFEDY MKEGPLAAID AIEKATGETK VHTAGYCVGG TLLATTLAWL ADKRRARVTS
ATFFAAQVDF THAGDLLVFV DEDQISALER DMQQSGVLEG SKMAMAFNML RSNDLIWSYV
VSNYLKGKTP PAFDLLHWNS DATRMPAANH SYYLRNCYLE NRLSTGSMVL DNTLLDLSKV
KVPIYNLATR DDHIAPAESV LYGSRFFGGP VRYVLSGSGH IAGVINPPPL GKYQYWTNDA
IGDTTLAEWM KGAQEHKGSW WPDWHAWLRN IDAEEVAARE VGSVALPPIE DAPGSYVRVR
A
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