Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Nham_2301 |
Symbol | |
ID | 4029673 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrobacter hamburgensis X14 |
Kingdom | Bacteria |
Replicon accession | NC_007964 |
Strand | - |
Start bp | 2556040 |
End bp | 2557077 |
Gene Length | 1038 bp |
Protein Length | 345 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637970762 |
Product | lysine--tRNA ligase |
Protein accession | YP_577553 |
Protein GI | 92117824 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.275563 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATCGAA TTTCACCCTG GTGGGACCGG GCCAGGCACG CGGACCGGCG GGCGTTTCTG CAGGCGCGCG TCGCCGTGAC CCGTGCGCTG CGGGCATGGT TCGACGCGCA GGGCTTCGTC GAGGTCGAAA CCGGCGTTTT GCAGGCGTCG CCGGGCAACG AAACCCACCT TCACGCGCCC CGCACCACGC TGACATCGCC GGCCGGCGAT CAGGTTACGC GCTACTTGCG CACCTCCCCG GAATTCGCCT GCAAGAAGCT GCTGGCGGCC GGTGAGCAGA AGGTCGTGGA GTTCGCGCGG GTGTTTCGGG ACCGCGAGCG CGGCGATCTG CACCTCGCTG AATTCACCAT GCTGGAGTGG TATCGCGCAG GCAGGTCCTA CGACGTCATC ATGGCCGACT GCATCGCCGT GATTGCCCGC GCGGCGAAGG CGACAGGTAT AGGCGCGTTC TCGTTTCGCG GCCGGCACGC CGATCCGTTT GCGGAGCCGG AATTACTGAC AGTCGCCGCC GCGTTCGATC GCTTCGCCGG GATCGACCTC TTGAAAACCG TGGTCGGCGG CGAGGGCGAT CGCGCCGCGC TGGCGGCGCA GGCGCGAGTG CGGATCGCGG ACGACGACAC CTGGTCGGAT ATTTTCAGCA AGGTGCTGGT CGAGCATGTC GAGCCCCGTC TCGGGCAGGG GAGGTTGACG ATACTGTCCA AATATCCAGC GCCGGAAGCC GCATTGGCGC GCATCGATCC GGCCGACAGC CGCGTTGCCG AGCGTTTCGA GATCTATGCC TGCGGCGTCG AGCTTGCGAA CGGGTTTGGT GAATTGACCG ACGCCGCCGA ACAGCGCATC CGTTTCAACC GGGCGATGGA CGACAAGCAA AGCCGCTACG GCGAGCGCTA TCCGCTGGAT GAGGATTTTC TTGCGGCGGT CGCGCAAATG CCGGAAGCGA GCGGGGTGGC GCTGGGCTTC GACCGGCTGG TGATGCTGGC AAGCGGCGCA TTGCGGATCG ATCAGGTGGT GTGGACGCCG CCTGCGGAGG ATGCATGA
|
Protein sequence | MNRISPWWDR ARHADRRAFL QARVAVTRAL RAWFDAQGFV EVETGVLQAS PGNETHLHAP RTTLTSPAGD QVTRYLRTSP EFACKKLLAA GEQKVVEFAR VFRDRERGDL HLAEFTMLEW YRAGRSYDVI MADCIAVIAR AAKATGIGAF SFRGRHADPF AEPELLTVAA AFDRFAGIDL LKTVVGGEGD RAALAAQARV RIADDDTWSD IFSKVLVEHV EPRLGQGRLT ILSKYPAPEA ALARIDPADS RVAERFEIYA CGVELANGFG ELTDAAEQRI RFNRAMDDKQ SRYGERYPLD EDFLAAVAQM PEASGVALGF DRLVMLASGA LRIDQVVWTP PAEDA
|
| |