Gene Nham_2261 details

Gene Information

• Locus tag: Nham_2261
• Symbol: mscL
• ID: 4033184
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: -
• Start bp: 2512541
• End bp: 2512960
• Gene Length: 420 bp
• Protein Length: 139 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 637970721
• Product: large-conductance mechanosensitive channel
• Protein accession: YP_577513
• Protein GI: 92117784
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1970] Large-conductance mechanosensitive channel
• TIGRFAM ID: [TIGR00220] large conductance mechanosensitive channel protein

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCTCAAGG AATTTCGTGA ATTTGCGATG AAGGGCAATG TCGTCGATCT CGCGGTCGCC 
GTCATCATCG GCGCCGCGTT CGGGGCCATC GTCTCCTCGA TGGTGGCCGA CGTCATTATG 
CCGATCATTG GCGCTGTCAC CGGCGGCCTC GACTTTTCCA ACTATTTCAC CGGTCTTTCG 
AAGACCGTTA CCGCGACCAA CCTTGCGGAC GCGAAAAAGC AGGGCGCGGT GCTGGCGTGG 
GGCAATTTCC TGACGCTGAC GCTGAACTTC CTGATCGTGG CCTTCGTGCT GTTCATGGTG 
GTTCGCTTCA TGAGCAAGCT GAAGCGCAAG GATGAGGCAG CACCCGCGGC GCCGCCGAAG 
CCGACCCGCG AGGAAGAACT GCTGACAGAA ATCCGCGATC TCCTGAAAAC GAAGAAATAG 

 

Protein sequence

MLKEFREFAM KGNVVDLAVA VIIGAAFGAI VSSMVADVIM PIIGAVTGGL DFSNYFTGLS 
KTVTATNLAD AKKQGAVLAW GNFLTLTLNF LIVAFVLFMV VRFMSKLKRK DEAAPAAPPK 
PTREEELLTE IRDLLKTKK