Gene Nham_2260 details

Gene Information

• Locus tag: Nham_2260
• Symbol: smpB
• ID: 4033183
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrobacter hamburgensis X14
• Kingdom: Bacteria
• Replicon accession: NC_007964
• Strand: -
• Start bp: 2512003
• End bp: 2512476
• Gene Length: 474 bp
• Protein Length: 157 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637970720
• Product: SsrA-binding protein
• Protein accession: YP_577512
• Protein GI: 92117783
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 25
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCCGAGA AGAACGAGCG CGCGATCAAG GTCGTCGCTG AAAACCGCAA GGCGCGGTTC 
AACTATGCGA TCGAGGATAC CGTCGAGGCC GGCATTGCGC TGACCGGAAC CGAGGTCAAG 
TCGGTCCGCA ACGGCAAGAC CACGATTGCC GAATCCTACG CCGATTCGAA AAACGGCGAG 
ATCTGGCTGA TCAATGCCAA CATCCCCGAA TACCTGCAAG CCAACCGCTT CAATCACGAG 
CCGAAGCGGC CGCGCAAGCT GCTGCTGCAC AGGAAGCAGA TCAACAAGCT GCTGGGCGCG 
GTCGATCGCG AGGGCATGAC GCTGATTCCG CTCAAGCTCT ATTTCAACGA ACGCGGACGG 
GCCAAGCTGC TGCTGGCGGT CGCCAAGGGC AAGAAGCTGC ACGACAAGCG CGAGAGCGAG 
AAGAAGCGCG ACTGGGGCCG CGAGAAAGGC CGGTTGCTGC GGGCGAGGGG ATGA 

 

Protein sequence

MAEKNERAIK VVAENRKARF NYAIEDTVEA GIALTGTEVK SVRNGKTTIA ESYADSKNGE 
IWLINANIPE YLQANRFNHE PKRPRKLLLH RKQINKLLGA VDREGMTLIP LKLYFNERGR 
AKLLLAVAKG KKLHDKRESE KKRDWGREKG RLLRARG