Gene Nham_2256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2256 
Symbol 
ID4033179 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2509442 
End bp2509834 
Gene Length393 bp 
Protein Length130 aa 
Translation table11 
GC content59% 
IMG OID637970716 
ProductDNA-directed RNA polymerase subunit omega 
Protein accessionYP_577508 
Protein GI92117779 
COG category[K] Transcription 
COG ID[COG1758] DNA-directed RNA polymerase, subunit K/omega 
TIGRFAM ID[TIGR00690] DNA-directed RNA polymerase, omega subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.366535 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCG TCACCGTGGA AGATTGCATT GACAAGGTCG ACAACCGGTT TGACCTGGTT 
CTTTTGGCCG CGCATCGTGC GCGGATGATT TCGTCGGGTT CGCAACTTAC GATTGATCGC
GATAACGACA AAAACCCGGT GGTTTCGCTC CGCGAGATTG CCGAGCAAAC CATCTCCCCC
GAAGATATGC GCGAAGAGCT GGTTCATTCC TTGCAGAAGT TTGTCGAGGT CGACGAGCCC
GAGCCCGACA CGGTGCCCTT GATCGGCTCG GCCGGGGCGA GCGTCGATGC TGACGACACC
GAGGTCGCCG TTGAGCGTAT GACAGAGGAA GAGTTGCTGA AGGGTCTGGA GGGGCTCGCA
CCTCGCGAGG AGCAGCCCGA AGAGGACGAA TGA
 
Protein sequence
MARVTVEDCI DKVDNRFDLV LLAAHRARMI SSGSQLTIDR DNDKNPVVSL REIAEQTISP 
EDMREELVHS LQKFVEVDEP EPDTVPLIGS AGASVDADDT EVAVERMTEE ELLKGLEGLA
PREEQPEEDE