Gene Nham_2232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNham_2232 
Symbol 
ID4030024 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrobacter hamburgensis X14 
KingdomBacteria 
Replicon accessionNC_007964 
Strand
Start bp2484517 
End bp2486016 
Gene Length1500 bp 
Protein Length499 aa 
Translation table11 
GC content67% 
IMG OID637970692 
Producthypothetical protein 
Protein accessionYP_577484 
Protein GI92117755 
COG category[G] Carbohydrate transport and metabolism
[S] Function unknown 
COG ID[COG0062] Uncharacterized conserved protein
[COG0063] Predicted sugar kinase 
TIGRFAM ID[TIGR00196] yjeF C-terminal region, hydroxyethylthiazole kinase-related
[TIGR00197] yjeF N-terminal region 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.282439 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGATTC TGACGACCGG TGAAATGGAG CAGGCTGACC GGCTTGCTAT TGCGGCTGGT 
GCGCCGGGCT TCGCTCTGAT GTTGCATGCC GGACAGGCGG TGGCGGATGC GGCCACCGAC
CTCGCCGGTC AAGGTCCGAT CCTGGTTGCC GCCGGGTGCG GCAATAACGG CGGGGACGGA
TTTGTCGCAG CGACCGAACT GGCGGCGCGC GGCCACGACG TTTCGGTTAT CCTGCTGTGC
GGGCGGGACA GCCTGAAGGG CGATGCCGCG CTCGCGGCGA AGGGCTGGAA AGGGCGGGTG
CTGCCTTGCG ACCTGTCCGC GCTCGGCTCG CCCGCGTTGA TTATCGACGC GCTGTTCGGC
GCAGGGCTCA ACCGCCCGGT CACGGGCGAC CCTCAGGCGA TGATCGAGGC GATCAACGCC
AACGGCGCGC CTGTGCTCAG CGTCGATCTG CCGAGCGGCA TCAACGGCAC CACCGGCGCG
ATCATGGGTG TCGCTGTACG CGCCACGGAG ACGGTGACGT TCTTTCGCAA GAAGCCGGCG
CATCTCTTGC TGCCCGGCCG AATTCACTGC GGCCGGGTGC GCGTTGCCGA CATCGGCATC
TCCGATGTGG TGCTGGATAA GATTCGTCCC GCAACCTTCG AGAATATCCC GGATTACTGG
CAAGGCGCGT TTCCGGTGCC GCGTATCGAC GGGCACAAAT ATGCGCGAGG ACACGCAGTC
ATCGTGTCCG GCGATCTGAC CTCGACGGGC GCTGCCCGAT TGTCGGCGCG CGGCGCGCTG
CGGGCCGGAG CCGGGCTTGT GAGCGTGCTC TCGCCGGACG ACGCGCTGGG TGCGAACACA
GCGTCGCTGA CTGCCGTGAT GGTTCGGCGC ATGAACGGCG CTGCCGGGTT TGCGGAAATC
CTGACGGACC GGCGCCTCAA TGCCTGCGTG ATCGGACCGG GGGCTGGAGT TGGGGAGGAG
ACCCGCGCGC TCGTATTGAC GGCGCTCGCG GCCAAGCCGG CGCTTGTGCT CGACGCCGAC
GCGCTGACGA GTTTTGCCGA TCTGCCGGCG CGTTTGTTCG AGGCCATCAA GGAAACCGGG
AATACCGACA TTATCCTGAC ACCGCACGAA GGCGAGTTCC GTCGCCTTTT CAGTGAGATG
AGCAATAAAC ATCCACTTCG CTCAAAACTT GAGCGGGTGC GCGCCGCGGC CGGACGTTCG
GGCGCGATTG TCCTGCTCAA GGGGCCCGAT ACAGTGGTGG CCTCACCCGA CGGGCGGGCG
ACGATCGCGG CCAACGCCCC GCCCTGGCTG GCCACGGCAG GTTCAGGCGA CGTGCTGTCC
GGCATGATCG GCGGGCTGCT GGCGCAGGGC GTGCCGGCTT TTGATGCGGC CTGCATCGGC
GTCTGGATGC ACGGCGAGGC AGGGCACGAG GCGGGCCCGG GGCTGATCGC TGAGGATTTG
CCGGAGGTGC TGCCGGCGGT GTTGCGGCGG CTCTATGATC GGTTCGGGAT CGACTACTGA
 
Protein sequence
MEILTTGEME QADRLAIAAG APGFALMLHA GQAVADAATD LAGQGPILVA AGCGNNGGDG 
FVAATELAAR GHDVSVILLC GRDSLKGDAA LAAKGWKGRV LPCDLSALGS PALIIDALFG
AGLNRPVTGD PQAMIEAINA NGAPVLSVDL PSGINGTTGA IMGVAVRATE TVTFFRKKPA
HLLLPGRIHC GRVRVADIGI SDVVLDKIRP ATFENIPDYW QGAFPVPRID GHKYARGHAV
IVSGDLTSTG AARLSARGAL RAGAGLVSVL SPDDALGANT ASLTAVMVRR MNGAAGFAEI
LTDRRLNACV IGPGAGVGEE TRALVLTALA AKPALVLDAD ALTSFADLPA RLFEAIKETG
NTDIILTPHE GEFRRLFSEM SNKHPLRSKL ERVRAAAGRS GAIVLLKGPD TVVASPDGRA
TIAANAPPWL ATAGSGDVLS GMIGGLLAQG VPAFDAACIG VWMHGEAGHE AGPGLIAEDL
PEVLPAVLRR LYDRFGIDY